Detailed information NTG0915022

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: ABRY24_RS12180
• Genome accession: NZ_CP159840
• Coordinates: 2055819..2056844 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PA64
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2050819..2061844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRY24_RS12155 (ABRY24_12155)	-	2051007..2051324 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
ABRY24_RS12160 (ABRY24_12160)	trkA	2051473..2052846 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
ABRY24_RS12165 (ABRY24_12165)	rsmB	2052874..2054178 (-)	1305	WP_023092224.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ABRY24_RS12170 (ABRY24_12170)	fmt	2054175..2055119 (-)	945	WP_023089593.1	methionyl-tRNA formyltransferase	-
ABRY24_RS12175 (ABRY24_12175)	def	2055174..2055680 (-)	507	WP_003107059.1	peptide deformylase	-
ABRY24_RS12180 (ABRY24_12180)	tsaP	2055819..2056844 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
ABRY24_RS12185 (ABRY24_12185)	dprA	2056979..2058067 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
ABRY24_RS12190 (ABRY24_12190)	-	2058108..2058665 (+)	558	WP_003097300.1	Sua5/YciO/YrdC/YwlC family protein	-
ABRY24_RS12195 (ABRY24_12195)	-	2058675..2059652 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
ABRY24_RS12200 (ABRY24_12200)	hemF	2059843..2060760 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
ABRY24_RS12205 (ABRY24_12205)	aroE	2060818..2061642 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=915022 ABRY24_RS12180 WP_003097294.1 2055819..2056844(+) (tsaP) [Pseudomonas aeruginosa strain PA64]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=915022 ABRY24_RS12180 WP_003097294.1 2055819..2056844(+) (tsaP) [Pseudomonas aeruginosa strain PA64]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGGCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393