Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   L6430_RS15040 Genome accession   NZ_AP025342
Coordinates   2958139..2958726 (+) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain J41TS8     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2953139..2963726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS15010 - 2953435..2953887 (+) 453 WP_020451204.1 flavodoxin -
  L6430_RS15015 dapD 2953994..2954704 (+) 711 WP_020451205.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  L6430_RS15020 - 2954774..2955898 (+) 1125 WP_020451206.1 N-acetyldiaminopimelate deacetylase -
  L6430_RS15025 - 2955961..2956206 (+) 246 WP_003181323.1 YkuS family protein -
  L6430_RS15030 ahpA 2956502..2957044 (+) 543 WP_020451207.1 biofilm-specific peroxidase AhpA -
  L6430_RS15035 - 2957134..2957592 (+) 459 WP_020451208.1 redoxin domain-containing protein -
  L6430_RS15040 rok 2958139..2958726 (+) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  L6430_RS15045 - 2958871..2959827 (-) 957 WP_023857286.1 sporulation protein -
  L6430_RS15050 mobA 2959980..2960567 (+) 588 WP_023857285.1 molybdenum cofactor guanylyltransferase -
  L6430_RS15055 - 2960673..2961686 (+) 1014 WP_023857284.1 molybdopterin-synthase adenylyltransferase MoeB -
  L6430_RS15060 glp 2961705..2962997 (+) 1293 WP_020451213.1 gephyrin-like molybdotransferase Glp -
  L6430_RS15065 mobB 2962964..2963491 (+) 528 WP_020451214.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=91479 L6430_RS15040 WP_020451209.1 2958139..2958726(+) (rok) [Bacillus paralicheniformis strain J41TS8]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=91479 L6430_RS15040 WP_020451209.1 2958139..2958726(+) (rok) [Bacillus paralicheniformis strain J41TS8]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815

Multiple sequence alignment