Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   L6430_RS13550 Genome accession   NZ_AP025342
Coordinates   2686838..2687476 (+) Length   212 a.a.
NCBI ID   WP_106070972.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain J41TS8     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2681838..2692476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS13520 - 2682486..2683553 (+) 1068 WP_020450934.1 ABC transporter ATP-binding protein -
  L6430_RS13525 - 2683555..2684478 (+) 924 WP_026579902.1 ABC transporter ATP-binding protein -
  L6430_RS13530 - 2684708..2685286 (+) 579 WP_003180619.1 GNAT family N-acetyltransferase -
  L6430_RS13535 spxA 2685464..2685859 (+) 396 WP_003180621.1 transcriptional regulator SpxA -
  L6430_RS13540 - 2685890..2686552 (-) 663 WP_020450936.1 TerC family protein -
  L6430_RS13545 - 2686731..2686856 (+) 126 Protein_2625 hypothetical protein -
  L6430_RS13550 mecA 2686838..2687476 (+) 639 WP_106070972.1 adaptor protein MecA Regulator
  L6430_RS13555 - 2687714..2689018 (+) 1305 WP_095290031.1 glycosyl hydrolase family 8 -
  L6430_RS13560 - 2689240..2690256 (+) 1017 WP_223254839.1 tripartite tricarboxylate transporter substrate binding protein -
  L6430_RS13565 - 2690359..2690814 (+) 456 WP_025811638.1 tripartite tricarboxylate transporter TctB family protein -
  L6430_RS13570 - 2690837..2692342 (+) 1506 WP_003180636.1 tripartite tricarboxylate transporter permease -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 25045.03 Da        Isoelectric Point: 4.2198

>NTDB_id=91474 L6430_RS13550 WP_106070972.1 2686838..2687476(+) (mecA) [Bacillus paralicheniformis strain J41TS8]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEMMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTRAQL
SKDGQKLELPIPEDKKQHVAEESLDALLDDFQKEEQAEEQKLQFVLKFDDFEDLISLSKMSISGCKTTLYSHENRYYLFV
DFSELPDEEVENQLSILLEYASESKTTIHMLKEYGTLIAADHALHTIKKHFA

Nucleotide


Download         Length: 639 bp        

>NTDB_id=91474 L6430_RS13550 WP_106070972.1 2686838..2687476(+) (mecA) [Bacillus paralicheniformis strain J41TS8]
ATGGAAATCGAAAGAATAAACGAACATACGGTTAAGTTTTATATTTCCTACGGTGATATCGAAGACCGCGGGTTTGACAG
AGAAGAAATTTGGTACAATCGAGAACGCAGTGAAGAGCTTTTTTGGGAAATGATGGACGAAGTGCACGAAGAAGAAGAGT
TTGCCGTTGAAGGCCCCCTTTGGATTCAAGTGCAGGCCCTTGATAAGGGATTGGAAATCATTGTGACAAGAGCTCAGCTG
TCCAAAGACGGACAAAAGCTGGAACTGCCGATTCCTGAAGATAAAAAACAGCATGTAGCAGAAGAAAGCCTTGATGCTTT
GCTTGACGACTTTCAAAAAGAAGAGCAGGCAGAAGAGCAGAAACTGCAGTTTGTTTTAAAGTTTGACGATTTTGAGGATT
TAATCTCACTGTCAAAAATGTCTATCAGCGGCTGCAAAACGACATTGTACTCTCACGAGAACCGCTATTATTTATTCGTG
GATTTCAGTGAACTGCCCGATGAAGAGGTGGAAAACCAGCTGAGCATTCTGCTGGAGTATGCCTCAGAATCAAAGACGAC
GATTCATATGCTGAAAGAGTATGGAACACTGATTGCAGCGGATCATGCTCTTCATACAATAAAAAAGCACTTCGCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

82.488

100

0.844

Multiple sequence alignment