Detailed information NTG0914711

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ24_RS14355
• Genome accession: NZ_CP159750
• Coordinates: 2776473..2777498 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z22-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2771473..2782498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ24_RS14325 (ABXJ24_14300)	zapB	2771557..2771802 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABXJ24_RS14330 (ABXJ24_14305)	rraA	2771887..2772372 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ24_RS14335 (ABXJ24_14310)	menA	2772465..2773391 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ24_RS14340 (ABXJ24_14315)	hslU	2773458..2774789 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABXJ24_RS14345 (ABXJ24_14320)	hslV	2774799..2775329 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ24_RS14350 (ABXJ24_14325)	ftsN	2775422..2776381 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ24_RS14355 (ABXJ24_14330)	cytR	2776473..2777498 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ24_RS14360 (ABXJ24_14335)	priA	2777654..2779852 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABXJ24_RS14365 (ABXJ24_14340)	rpmE	2780055..2780267 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ24_RS14370 (ABXJ24_14345)	yiiX	2780328..2780936 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABXJ24_RS14375 (ABXJ24_14350)	metJ	2780996..2781313 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=914711 ABXJ24_RS14355 WP_000644908.1 2776473..2777498(-) (cytR) [Escherichia coli strain Z22-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=914711 ABXJ24_RS14355 WP_000644908.1 2776473..2777498(-) (cytR) [Escherichia coli strain Z22-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625