Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   L6430_RS11235 Genome accession   NZ_AP025342
Coordinates   2253073..2253864 (+) Length   263 a.a.
NCBI ID   WP_048350619.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain J41TS8     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2248073..2258864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS11205 - 2249253..2250149 (+) 897 WP_146874557.1 PhzF family phenazine biosynthesis isomerase -
  L6430_RS11210 - 2250252..2250830 (+) 579 WP_020450617.1 nitroreductase family protein -
  L6430_RS11215 - 2250864..2251058 (-) 195 WP_020450618.1 YfhD family protein -
  L6430_RS11220 - 2251127..2251240 (-) 114 WP_023856002.1 YfhE family protein -
  L6430_RS11225 - 2251308..2251838 (-) 531 WP_020450619.1 GNAT family N-acetyltransferase -
  L6430_RS11230 - 2252105..2253004 (-) 900 WP_236808669.1 TIGR01777 family oxidoreductase -
  L6430_RS11235 recX 2253073..2253864 (+) 792 WP_048350619.1 recombination regulator RecX Regulator
  L6430_RS11240 - 2253869..2254183 (+) 315 WP_065644618.1 YfhH family protein -
  L6430_RS11245 - 2254213..2254341 (-) 129 WP_369878957.1 YpzG family protein -
  L6430_RS11250 - 2254410..2254559 (-) 150 WP_003179924.1 small, acid-soluble spore protein K -
  L6430_RS11255 - 2254690..2254959 (+) 270 WP_026580622.1 YfhJ family protein -
  L6430_RS11260 - 2255702..2256661 (+) 960 WP_020450623.1 glycosyltransferase family 2 protein -
  L6430_RS11265 - 2256630..2257031 (+) 402 WP_020450624.1 GtrA family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30392.61 Da        Isoelectric Point: 6.7703

>NTDB_id=91461 L6430_RS11235 WP_048350619.1 2253073..2253864(+) (recX) [Bacillus paralicheniformis strain J41TS8]
MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKRALDYLSYRMRSTKEV
KDHLKKKDVADSAITEILHMLKGYKYLDDREFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIQEALSSFSFSDQVEA
AVKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENDDSAEREALEKQGEKAMKRCGYDGSYETKMK
VKQHLFRKGFSIDMIDQFLDEKG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=91461 L6430_RS11235 WP_048350619.1 2253073..2253864(+) (recX) [Bacillus paralicheniformis strain J41TS8]
ATGCCATATATTACAAAGATTTCTGCCCAGAAAAACAATGAAGAACGGGTCAATATTTTTCTGGATGAAAAGTATGCGTT
CAGCGTCGACCTGGACGTGCTCGTCAAGTTTGACCTGCGAAAAGGCAAAGAGCTTGATGAGCTTGATATCATTGAGATTC
AGTACGGAGACGACGTTAAAAAAGGGTTCAAAAGAGCGCTCGATTATTTGTCATACCGGATGCGCTCGACAAAGGAAGTT
AAAGACCATCTCAAGAAAAAAGACGTCGCAGACTCCGCGATCACAGAAATCCTGCATATGCTTAAAGGTTATAAATATTT
GGACGACCGCGAATTTGCGGCTGCATATGTCAGCACCCACAGAAAAACGAGCGGCAAAGGCCCCGATGTCCTATTCAGAG
AGCTTAAATTGAAAGGGATCGATGATGAACTGATTCAGGAAGCGCTCAGTTCGTTTTCGTTTTCCGATCAGGTCGAGGCC
GCGGTCAAGCATGCGGAAAAAGTGCTGAAAAAAGAAAAAAAGCTGTCCTCCAAAGAGACGAAACAGGCCATCGAACAGCA
CCTTGTCAGAAAGGGGTTCTCCTTCGATGTCATCTCGGCCGCGCTTCAGGAAACGGATTACGAAAACGACGACAGCGCTG
AAAGGGAAGCGCTTGAGAAGCAAGGGGAAAAAGCGATGAAGAGGTGCGGTTATGACGGATCATACGAAACGAAAATGAAG
GTCAAACAGCATCTGTTCAGAAAAGGCTTTTCAATCGACATGATTGATCAATTTTTAGATGAAAAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

70.881

99.24

0.703

Multiple sequence alignment