Detailed information NTG0914473

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: SPH25_RS07105
• Genome accession: NZ_CP140484
• Coordinates: 1483521..1484960 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751665.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 52N
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1478521..1489960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPH25_RS07080	recG	1479661..1481526 (-)	1866	WP_001158368.1	ATP-dependent DNA helicase RecG	-
SPH25_RS07085	-	1481608..1481955 (+)	348	WP_000837038.1	hypothetical protein	-
SPH25_RS07090	-	1481959..1482594 (+)	636	WP_000668077.1	outer membrane protein	-
SPH25_RS07095	-	1482591..1483343 (-)	753	WP_000767504.1	exodeoxyribonuclease III	-
SPH25_RS07105	comH	1483521..1484960 (-)	1440	WP_000751665.1	hypothetical protein	Machinery gene
SPH25_RS07110	dnaA	1485181..1486548 (-)	1368	WP_000380604.1	chromosomal replication initiator protein DnaA	-
SPH25_RS07115	-	1486700..1487236 (+)	537	WP_000922953.1	purine-nucleoside phosphorylase	-
SPH25_RS07120	-	1487283..1487522 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
SPH25_RS07125	glmS	1487523..1489316 (+)	1794	WP_000334407.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54907.78 Da
• Isoelectric Point: 6.8744

>NTDB_id=914473 SPH25_RS07105 WP_000751665.1 1483521..1484960(-) (comH) [Helicobacter pylori strain 52N]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYTESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNANINEHDESNENRDNGEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=914473 SPH25_RS07105 WP_000751665.1 1483521..1484960(-) (comH) [Helicobacter pylori strain 52N]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACACTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCAC
AGCAATCTCTTCAAAACTTTTCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAATAGCCTTTTACAACCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTA
ATGAACACGATGAAAGCAATGAAAATAGGGATAATGGGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCCTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACACCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929