Detailed information NTG0914458

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: SPH25_RS00225
• Genome accession: NZ_CP140484
• Coordinates: 40726..42039 (+)
• Length: 437 a.a.
• NCBI ID: WP_000653539.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 52N
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 35726..47039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPH25_RS00200	-	35735..35959 (+)	225	Protein_33	restriction endonuclease	-
SPH25_RS00205	crdR	36046..36687 (+)	642	WP_001169802.1	copper response regulator transcription factor CrdR	-
SPH25_RS00210	crdS	36653..37855 (+)	1203	WP_079990907.1	copper-sensing histidine kinase CrdS	-
SPH25_RS00215	-	37858..39252 (+)	1395	WP_000954041.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
SPH25_RS00220	-	39263..40729 (+)	1467	WP_000349778.1	replicative DNA helicase	-
SPH25_RS00225	comEC/comE3	40726..42039 (+)	1314	WP_000653539.1	ComEC/Rec2 family competence protein	Machinery gene
SPH25_RS00230	mqnP	42110..42952 (+)	843	WP_228839862.1	menaquinone biosynthesis prenyltransferase MqnP	-
SPH25_RS00235	-	42945..43439 (+)	495	WP_042349022.1	hypothetical protein	-
SPH25_RS00240	-	43452..43955 (+)	504	WP_000953117.1	DUF6115 domain-containing protein	-
SPH25_RS00245	-	43952..44755 (+)	804	WP_000561113.1	phosphatidylserine decarboxylase	-
SPH25_RS00250	nadA	44745..45755 (+)	1011	WP_001141819.1	quinolinate synthase NadA	-
SPH25_RS00255	nadC	45755..46576 (+)	822	WP_000404072.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50223.21 Da
• Isoelectric Point: 9.8366

>NTDB_id=914458 SPH25_RS00225 WP_000653539.1 40726..42039(+) (comEC/comE3) [Helicobacter pylori strain 52N]
MKDKTFQGAFELLATPKEYLLCGVILSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRYAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRRFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLVRSFQVISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLILHAVDLGSLLDSILNMPLTIPTISVFSPLWLLGTHLFLT
ILSARFFKVYVSMNVLSVGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=914458 SPH25_RS00225 WP_000653539.1 40726..42039(+) (comEC/comE3) [Helicobacter pylori strain 52N]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
CCTTTTGTTAGCGCTTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
GTTCTTAGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGGAAACAAGATTTCAAATCGCATT
GGCGCCGTTTCATTGATAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTATACCGCGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGGGACAGGGCTAATGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TCTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGTGCGATCTTTTCAGGTCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTATTTTTCCCTTTGAGTTTAATCTTGCATGCTGTGGATTTGGGGTCTTTGTTGGATTCCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGACGCATTTATTTTTAACG
ATTCTAAGCGCGCGTTTTTTTAAAGTTTATGTAAGCATGAATGTTTTGAGTGTGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.05	100	0.941