Detailed information NTG0914436

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: SPG78_RS00240
• Genome accession: NZ_CP140483
• Coordinates: 48337..49650 (+)
• Length: 437 a.a.
• NCBI ID: WP_000653578.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 51N
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 43337..54650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG78_RS00220	crdR	43657..44298 (+)	642	WP_001169817.1	copper response regulator transcription factor CrdR	-
SPG78_RS00225	crdS	44264..45466 (+)	1203	WP_079988389.1	copper-sensing histidine kinase CrdS	-
SPG78_RS00230	-	45469..46863 (+)	1395	WP_000954079.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
SPG78_RS00235	-	46874..48340 (+)	1467	WP_000349966.1	replicative DNA helicase	-
SPG78_RS00240	comEC/comE3	48337..49650 (+)	1314	WP_000653578.1	ComEC/Rec2 family competence protein	Machinery gene
SPG78_RS00245	mqnP	49679..50563 (+)	885	WP_000913964.1	menaquinone biosynthesis prenyltransferase MqnP	-
SPG78_RS00250	-	50556..51050 (+)	495	WP_041201980.1	hypothetical protein	-
SPG78_RS00255	-	51063..51566 (+)	504	WP_000953083.1	DUF6115 domain-containing protein	-
SPG78_RS00260	-	51563..52366 (+)	804	WP_000968155.1	phosphatidylserine decarboxylase	-
SPG78_RS00265	nadA	52356..53366 (+)	1011	WP_001141818.1	quinolinate synthase NadA	-
SPG78_RS00270	nadC	53366..54187 (+)	822	WP_000404026.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50082.94 Da
• Isoelectric Point: 9.7741

>NTDB_id=914436 SPG78_RS00240 WP_000653578.1 48337..49650(+) (comEC/comE3) [Helicobacter pylori strain 51N]
MKDKTFQGAFELLSTPKEYLVCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
ALIFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDSILNMPLTIPTISVFSPLWLLGAHLFLT
ILSAHFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=914436 SPG78_RS00240 WP_000653578.1 48337..49650(+) (comEC/comE3) [Helicobacter pylori strain 51N]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACCTGGTGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTTGGCAAAATCAAGCCCTGCTC
GTTCTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGAGGAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGATAGTGCTCATTCAAGCGCTTTAGTGGGGAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCATG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAGGTCATAAGCTTAAGC
GCACTAATTTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGTTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGCTAGATAGCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGCGCATTTATTTTTAACG
ATTCTAAGCGCGCATTTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.423	100	0.954