Detailed information NTG0091424

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: L6450_RS18260
• Genome accession: NZ_AP025340
• Coordinates: 3614210..3615589 (+)
• Length: 459 a.a.
• NCBI ID: WP_020449839.1
• Uniprot ID: A0AAW6KF37
• Organism: Bacillus paralicheniformis strain J36TS2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3609210..3620589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6450_RS18240	-	3609577..3610041 (+)	465	WP_020449835.1	CtsR family transcriptional regulator	-
L6450_RS18245	-	3610056..3610610 (+)	555	WP_003178271.1	UvrB/UvrC motif-containing protein	-
L6450_RS18250	-	3610610..3611701 (+)	1092	WP_020449837.1	protein arginine kinase	-
L6450_RS18255	clpC	3611698..3614130 (+)	2433	WP_020449838.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
L6450_RS18260	radA	3614210..3615589 (+)	1380	WP_020449839.1	DNA repair protein RadA	Machinery gene
L6450_RS18265	disA	3615593..3616669 (+)	1077	WP_020449840.1	DNA integrity scanning diadenylate cyclase DisA	-
L6450_RS18270	-	3616801..3617889 (+)	1089	WP_009330350.1	PIN/TRAM domain-containing protein	-
L6450_RS18275	ispD	3617906..3618601 (+)	696	WP_020449841.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
L6450_RS18280	ispF	3618594..3619070 (+)	477	WP_020449842.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49848.28 Da
• Isoelectric Point: 7.4339

>NTDB_id=91424 L6450_RS18260 WP_020449839.1 3614210..3615589(+) (radA) [Bacillus paralicheniformis strain J36TS2]
MAKTKTKFICHSCGYESAKWMGKCPGCGTWNTMVEETIKKPAANRRTAFSHSVQTVQKPSPLTSIETTEEPRIKTKLGEF
NRVLGNGIVKGSLVLIGGDPGIGKSTLLLQVSAQLADSKENVLYISGEESVKQTKLRADRLGINSPTLHVLSETDMEYIT
SSIEEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMRIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGAAGSSVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAVAVSIASSFRDTPPHPTDCFIGEVGLT
GEVRRVSRIEQRVQEAAKLGFKRMIIPSANVEGWTKPKGIEVVGVENVAEALRASLGGS

Nucleotide

• Length: 1380 bp

>NTDB_id=91424 L6450_RS18260 WP_020449839.1 3614210..3615589(+) (radA) [Bacillus paralicheniformis strain J36TS2]
ATGGCTAAAACAAAGACTAAATTCATTTGTCACTCATGCGGTTACGAATCCGCCAAGTGGATGGGGAAGTGCCCCGGATG
CGGCACATGGAATACCATGGTGGAAGAAACGATAAAAAAACCCGCCGCCAACAGAAGAACCGCTTTTTCACATTCCGTTC
AAACGGTGCAAAAGCCTTCACCTCTCACTTCAATCGAAACAACAGAAGAGCCGCGAATTAAAACGAAACTGGGCGAATTC
AACCGCGTCTTGGGAAACGGTATTGTCAAAGGTTCACTCGTTTTAATCGGAGGCGATCCCGGCATCGGGAAATCAACCTT
GCTGCTTCAAGTATCTGCCCAGCTCGCTGATTCAAAAGAAAATGTCCTGTACATCTCAGGTGAAGAATCGGTCAAGCAGA
CAAAGCTGAGAGCAGACCGTCTAGGCATCAACAGTCCCACTCTTCACGTTTTATCTGAAACCGATATGGAGTATATTACG
TCTTCTATAGAAGAGATGAATCCATCATTCGTGGTGGTTGATTCGATTCAAACCGTTTACCAAAGTGATATTACATCTGC
TCCAGGCAGCGTGTCCCAGGTCAGGGAATGCACCGCTGAGCTGATGAGAATTGCAAAAACAAAAGGGATTCCGATATTTA
TCGTCGGGCATGTCACAAAAGAAGGTTCGATTGCCGGACCGAGACTTCTGGAACATATGGTCGACACCGTCCTTTATTTT
GAAGGTGAGCGGCATCATACATTTCGGATTTTAAGAGCCGTCAAAAACCGGTTTGGATCAACGAATGAAATGGGAATCTT
TGAAATGAGGGAAGAGGGCCTGACAGAAGTGCTGAATCCGTCGGAGATCTTTCTCGAAGAGCGCTCGGCTGGAGCAGCCG
GCTCGAGTGTCGTGGCTTCAATGGAAGGCACGAGGCCGGTCTTAGTAGAGATTCAGGCGCTGATTTCCCCGACGAGTTTT
GGAAATCCGCGCAGGATGGCAACCGGAATTGATCATAACCGCGTCTCATTGCTGATGGCGGTTTTAGAAAAAAGGGTGGG
GCTGCTGCTGCAAAATCAAGACGCCTATTTAAAAGTCGCCGGCGGCGTCAAGCTGGACGAGCCGGCGATCGACCTCGCCG
TTGCGGTGAGCATCGCCTCAAGCTTCAGAGACACCCCGCCTCATCCGACGGATTGTTTTATCGGCGAAGTCGGCTTGACA
GGGGAAGTCCGCAGAGTATCAAGGATAGAACAGAGGGTGCAGGAAGCGGCGAAGCTTGGTTTTAAAAGAATGATTATTCC
TTCTGCAAATGTGGAAGGATGGACAAAGCCGAAAGGAATTGAAGTCGTCGGCGTTGAAAATGTAGCTGAGGCCCTTCGAG
CTTCATTAGGAGGATCATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (66-222)

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	91.048	99.782	0.908
radA	Streptococcus mitis NCTC 12261	62.031	98.693	0.612
radA	Streptococcus pneumoniae Rx1	62.031	98.693	0.612
radA	Streptococcus pneumoniae D39	62.031	98.693	0.612
radA	Streptococcus pneumoniae R6	62.031	98.693	0.612
radA	Streptococcus pneumoniae TIGR4	62.031	98.693	0.612
radA	Streptococcus mitis SK321	61.81	98.693	0.61