Detailed information NTG0914180

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: U2S75_RS09155
• Genome accession: NZ_CP140420
• Coordinates: 1910026..1910727 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain 2023CK-00893
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1905026..1915727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2S75_RS09120 (U2S75_09115)	kdsB	1905549..1906310 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U2S75_RS09125 (U2S75_09120)	-	1906322..1907302 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
U2S75_RS09130 (U2S75_09125)	-	1907314..1907655 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
U2S75_RS09135 (U2S75_09130)	-	1907673..1908446 (+)	774	WP_064192512.1	TatD family hydrolase	-
U2S75_RS09140 (U2S75_09135)	-	1908484..1909092 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
U2S75_RS09145 (U2S75_09140)	-	1909102..1909656 (+)	555	WP_000841373.1	type II secretion system protein	-
U2S75_RS09150 (U2S75_09145)	xcpV	1909646..1910026 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
U2S75_RS09155 (U2S75_09150)	xcpW	1910026..1910727 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
U2S75_RS09160 (U2S75_09155)	gspK	1910727..1911686 (+)	960	WP_064194333.1	type II secretion system minor pseudopilin GspK	-
U2S75_RS09165 (U2S75_09160)	-	1911916..1912512 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
U2S75_RS09170 (U2S75_09165)	ung	1912563..1913276 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
U2S75_RS09175 (U2S75_09170)	-	1913273..1914397 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
U2S75_RS09180 (U2S75_09175)	tadA	1914404..1914908 (+)	505	Protein_1796	tRNA adenosine(34) deaminase TadA	-
U2S75_RS09185 (U2S75_09180)	-	1914978..1915421 (+)	444	WP_001246673.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=914180 U2S75_RS09155 WP_004747380.1 1910026..1910727(+) (xcpW) [Acinetobacter baumannii strain 2023CK-00893]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=914180 U2S75_RS09155 WP_004747380.1 1910026..1910727(+) (xcpW) [Acinetobacter baumannii strain 2023CK-00893]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996