Detailed information NTG0914032

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ13_RS04155
• Genome accession: NZ_CP159689
• Coordinates: 766033..767058 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Z142-6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 761033..772058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ13_RS04135 (ABXJ13_04135)	metJ	762094..762411 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABXJ13_RS04140 (ABXJ13_04140)	yiiX	762595..763203 (+)	609	WP_016244088.1	YiiX family permuted papain-like enzyme	-
ABXJ13_RS04145 (ABXJ13_04145)	rpmE	763264..763476 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ13_RS04150 (ABXJ13_04150)	priA	763679..765877 (+)	2199	WP_219411676.1	primosomal protein N'	Machinery gene
ABXJ13_RS04155 (ABXJ13_04155)	cytR	766033..767058 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ13_RS04160 (ABXJ13_04160)	ftsN	767150..768109 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ13_RS04165 (ABXJ13_04165)	hslV	768202..768732 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ13_RS04170 (ABXJ13_04170)	hslU	768742..770073 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABXJ13_RS04175 (ABXJ13_04175)	menA	770140..771066 (+)	927	WP_340012640.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ13_RS04180 (ABXJ13_04180)	rraA	771159..771644 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ13_RS04185 (ABXJ13_04185)	zapB	771729..771974 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=914032 ABXJ13_RS04155 WP_000644904.1 766033..767058(+) (cytR) [Escherichia coli strain Z142-6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=914032 ABXJ13_RS04155 WP_000644904.1 766033..767058(+) (cytR) [Escherichia coli strain Z142-6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCACAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628