Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   U2S77_RS06970 Genome accession   NZ_CP140386
Coordinates   1354572..1355756 (-) Length   394 a.a.
NCBI ID   WP_002875236.1    Uniprot ID   A0A5T0M325
Organism   Campylobacter jejuni strain PNUSAC037670     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1349572..1360756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2S77_RS06945 (U2S77_06945) fliL 1350720..1351256 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  U2S77_RS06950 (U2S77_06950) acpS 1351256..1351603 (+) 348 WP_002825806.1 holo-ACP synthase -
  U2S77_RS06955 (U2S77_06955) - 1351604..1352023 (-) 420 WP_002855518.1 hypothetical protein -
  U2S77_RS06960 (U2S77_06960) - 1352020..1353381 (-) 1362 WP_002930948.1 cytochrome P450 -
  U2S77_RS06965 (U2S77_06965) - 1353378..1354499 (-) 1122 WP_002894818.1 hypothetical protein -
  U2S77_RS06970 (U2S77_06970) kpsS 1354572..1355756 (-) 1185 WP_002875236.1 capsule polysaccharide modification protein KpsS Regulator
  U2S77_RS06975 (U2S77_06975) kpsC 1355753..1357822 (-) 2070 WP_002894815.1 capsular polysaccharide biosynthesis protein -
  U2S77_RS06980 (U2S77_06980) cysC 1357819..1358331 (-) 513 WP_002894813.1 cytidine diphosphoramidate kinase -
  U2S77_RS06985 (U2S77_06985) - 1358321..1359082 (-) 762 WP_002872736.1 CTP:phosphoglutamine cytidylyltransferase -
  U2S77_RS06990 (U2S77_06990) - 1359084..1359686 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46865.54 Da        Isoelectric Point: 9.9073

>NTDB_id=913910 U2S77_RS06970 WP_002875236.1 1354572..1355756(-) (kpsS) [Campylobacter jejuni strain PNUSAC037670]
MRFSTKIKKEFSGKNILLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=913910 U2S77_RS06970 WP_002875236.1 1354572..1355756(-) (kpsS) [Campylobacter jejuni strain PNUSAC037670]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATATTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0M325

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.985

100

0.99