Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | U2S84_RS05700 | Genome accession | NZ_CP140378 |
| Coordinates | 1091064..1092017 (+) | Length | 317 a.a. |
| NCBI ID | WP_052853944.1 | Uniprot ID | A0A1J6QE79 |
| Organism | Campylobacter jejuni strain PNUSAC038560 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1086064..1097017
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U2S84_RS05670 (U2S84_05670) | neuC | 1086640..1087764 (+) | 1125 | WP_052853946.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| U2S84_RS05675 (U2S84_05675) | - | 1087757..1088374 (+) | 618 | WP_016818193.1 | glycosyltransferase | - |
| U2S84_RS05680 (U2S84_05680) | - | 1088371..1088703 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| U2S84_RS05685 (U2S84_05685) | - | 1088700..1089365 (+) | 666 | WP_002869017.1 | cytidylyltransferase domain-containing protein | - |
| U2S84_RS05690 (U2S84_05690) | - | 1089353..1090186 (+) | 834 | WP_322631826.1 | CatB-related O-acetyltransferase | - |
| U2S84_RS05695 (U2S84_05695) | - | 1090178..1091005 (-) | 828 | WP_002869015.1 | glycosyltransferase family 2 protein | - |
| U2S84_RS05700 (U2S84_05700) | waaF | 1091064..1092017 (+) | 954 | WP_052853944.1 | glycosyltransferase family 9 protein | Regulator |
| U2S84_RS05705 (U2S84_05705) | - | 1092024..1092779 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| U2S84_RS05710 (U2S84_05710) | gmhA | 1092779..1093339 (-) | 561 | WP_002869012.1 | D-sedoheptulose 7-phosphate isomerase | - |
| U2S84_RS05715 (U2S84_05715) | rfaE1 | 1093336..1094721 (-) | 1386 | WP_322631827.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| U2S84_RS05720 (U2S84_05720) | rfaD | 1094714..1095667 (-) | 954 | WP_002852832.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| U2S84_RS05725 (U2S84_05725) | gmhB | 1095668..1096228 (-) | 561 | WP_002878815.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| U2S84_RS05730 (U2S84_05730) | - | 1096310..1096612 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| U2S84_RS05735 (U2S84_05735) | ccoS | 1096635..1096841 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36556.21 Da Isoelectric Point: 10.3630
>NTDB_id=913849 U2S84_RS05700 WP_052853944.1 1091064..1092017(+) (waaF) [Campylobacter jejuni strain PNUSAC038560]
MKIFIHLPTWLGDAVMASPALYAIKKHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASPALYAIKKHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=913849 U2S84_RS05700 WP_052853944.1 1091064..1092017(+) (waaF) [Campylobacter jejuni strain PNUSAC038560]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAAAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAAAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.312 |
99.054 |
0.924 |