Detailed information NTG0913828

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ31_RS15845
• Genome accession: NZ_CP159644
• Coordinates: 3240995..3242020 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Z226-5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3235995..3247020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ31_RS15820 (ABXJ31_15820)	metJ	3236432..3236749 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABXJ31_RS15825 (ABXJ31_15825)	yiiX	3236933..3237541 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ABXJ31_RS15830 (ABXJ31_15830)	-	3237548..3238171 (+)	624	WP_354142919.1	TIGR02117 family protein	-
ABXJ31_RS15835 (ABXJ31_15835)	rpmE	3238226..3238438 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ31_RS15840 (ABXJ31_15840)	priA	3238641..3240839 (+)	2199	WP_001295520.1	primosomal protein N'	Machinery gene
ABXJ31_RS15845 (ABXJ31_15845)	cytR	3240995..3242020 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ31_RS15850 (ABXJ31_15850)	ftsN	3242112..3243071 (+)	960	WP_071598226.1	cell division protein FtsN	-
ABXJ31_RS15855 (ABXJ31_15855)	hslV	3243164..3243694 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ31_RS15860 (ABXJ31_15860)	hslU	3243704..3245035 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABXJ31_RS15865 (ABXJ31_15865)	menA	3245102..3246028 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ31_RS15870 (ABXJ31_15870)	rraA	3246121..3246606 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ31_RS15875 (ABXJ31_15875)	zapB	3246691..3246936 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=913828 ABXJ31_RS15845 WP_000644904.1 3240995..3242020(+) (cytR) [Escherichia coli strain Z226-5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=913828 ABXJ31_RS15845 WP_000644904.1 3240995..3242020(+) (cytR) [Escherichia coli strain Z226-5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628