Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | U2S87_RS05695 | Genome accession | NZ_CP140374 |
| Coordinates | 1091062..1092015 (+) | Length | 317 a.a. |
| NCBI ID | WP_052853944.1 | Uniprot ID | A0A1J6QE79 |
| Organism | Campylobacter jejuni strain PNUSAC039152 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1086062..1097015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U2S87_RS05665 (U2S87_05665) | neuC | 1086638..1087762 (+) | 1125 | WP_052853946.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| U2S87_RS05670 (U2S87_05670) | - | 1087755..1088372 (+) | 618 | WP_016818193.1 | glycosyltransferase | - |
| U2S87_RS05675 (U2S87_05675) | - | 1088369..1088701 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| U2S87_RS05680 (U2S87_05680) | - | 1088698..1089363 (+) | 666 | WP_002869017.1 | cytidylyltransferase domain-containing protein | - |
| U2S87_RS05685 (U2S87_05685) | - | 1089351..1090184 (+) | 834 | WP_322631826.1 | CatB-related O-acetyltransferase | - |
| U2S87_RS05690 (U2S87_05690) | - | 1090176..1091003 (-) | 828 | WP_002869015.1 | glycosyltransferase family 2 protein | - |
| U2S87_RS05695 (U2S87_05695) | waaF | 1091062..1092015 (+) | 954 | WP_052853944.1 | glycosyltransferase family 9 protein | Regulator |
| U2S87_RS05700 (U2S87_05700) | - | 1092022..1092777 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| U2S87_RS05705 (U2S87_05705) | gmhA | 1092777..1093337 (-) | 561 | WP_002869012.1 | D-sedoheptulose 7-phosphate isomerase | - |
| U2S87_RS05710 (U2S87_05710) | rfaE1 | 1093334..1094719 (-) | 1386 | WP_322631827.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| U2S87_RS05715 (U2S87_05715) | rfaD | 1094712..1095665 (-) | 954 | WP_002852832.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| U2S87_RS05720 (U2S87_05720) | gmhB | 1095666..1096226 (-) | 561 | WP_002878815.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| U2S87_RS05725 (U2S87_05725) | - | 1096308..1096610 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| U2S87_RS05730 (U2S87_05730) | ccoS | 1096633..1096839 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36556.21 Da Isoelectric Point: 10.3630
>NTDB_id=913822 U2S87_RS05695 WP_052853944.1 1091062..1092015(+) (waaF) [Campylobacter jejuni strain PNUSAC039152]
MKIFIHLPTWLGDAVMASPALYAIKKHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASPALYAIKKHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=913822 U2S87_RS05695 WP_052853944.1 1091062..1092015(+) (waaF) [Campylobacter jejuni strain PNUSAC039152]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAAAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAAAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.312 |
99.054 |
0.924 |