Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | U2S96_RS05345 | Genome accession | NZ_CP140370 |
| Coordinates | 1022536..1022838 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain PNUSAC040311 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1017536..1027838
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U2S96_RS05320 (U2S96_05320) | rpsR | 1017898..1018158 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| U2S96_RS05325 (U2S96_05325) | lon | 1018219..1020594 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| U2S96_RS05330 (U2S96_05330) | - | 1020611..1021258 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| U2S96_RS05335 (U2S96_05335) | fliW | 1021419..1021808 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| U2S96_RS05340 (U2S96_05340) | proC | 1021808..1022539 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| U2S96_RS05345 (U2S96_05345) | ctsT | 1022536..1022838 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| U2S96_RS05350 (U2S96_05350) | - | 1022835..1023497 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| U2S96_RS05355 (U2S96_05355) | - | 1023494..1023946 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| U2S96_RS05360 (U2S96_05360) | hemD | 1023943..1024572 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| U2S96_RS05365 (U2S96_05365) | thiE | 1024550..1025182 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| U2S96_RS05370 (U2S96_05370) | thiD | 1025172..1025984 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| U2S96_RS05375 (U2S96_05375) | - | 1025981..1026667 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| U2S96_RS05380 (U2S96_05380) | - | 1026664..1027425 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=913793 U2S96_RS05345 WP_002853046.1 1022536..1022838(+) (ctsT) [Campylobacter jejuni strain PNUSAC040311]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=913793 U2S96_RS05345 WP_002853046.1 1022536..1022838(+) (ctsT) [Campylobacter jejuni strain PNUSAC040311]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |