Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   L6450_RS03780 Genome accession   NZ_AP025340
Coordinates   720683..721270 (+) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain J36TS2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 715683..726270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6450_RS03750 - 715990..716442 (+) 453 WP_011197942.1 flavodoxin -
  L6450_RS03755 dapD 716548..717258 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  L6450_RS03760 - 717327..718451 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  L6450_RS03765 - 718514..718759 (+) 246 WP_003181323.1 YkuS family protein -
  L6450_RS03770 ahpA 719054..719596 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  L6450_RS03775 - 719678..720136 (+) 459 WP_003181327.1 TlpA family protein disulfide reductase -
  L6450_RS03780 rok 720683..721270 (+) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  L6450_RS03785 - 721415..722371 (-) 957 WP_020451210.1 sporulation protein YknT -
  L6450_RS03790 mobA 722524..723111 (+) 588 WP_020451211.1 molybdenum cofactor guanylyltransferase -
  L6450_RS03795 - 723217..724230 (+) 1014 WP_020451212.1 molybdopterin-synthase adenylyltransferase MoeB -
  L6450_RS03800 glp 724249..725541 (+) 1293 WP_020451213.1 gephyrin-like molybdotransferase Glp -
  L6450_RS03805 mobB 725508..726035 (+) 528 WP_020451214.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=91376 L6450_RS03780 WP_020451209.1 720683..721270(+) (rok) [Bacillus paralicheniformis strain J36TS2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=91376 L6450_RS03780 WP_020451209.1 720683..721270(+) (rok) [Bacillus paralicheniformis strain J36TS2]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815

Multiple sequence alignment