Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | U2S85_RS05340 | Genome accession | NZ_CP140350 |
| Coordinates | 1020526..1020828 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain PNUSAC038648 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1015526..1025828
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U2S85_RS05315 (U2S85_05315) | rpsR | 1015888..1016148 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| U2S85_RS05320 (U2S85_05320) | lon | 1016209..1018584 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| U2S85_RS05325 (U2S85_05325) | - | 1018601..1019248 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| U2S85_RS05330 (U2S85_05330) | fliW | 1019409..1019798 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| U2S85_RS05335 (U2S85_05335) | proC | 1019798..1020529 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| U2S85_RS05340 (U2S85_05340) | ctsT | 1020526..1020828 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| U2S85_RS05345 (U2S85_05345) | - | 1020825..1021487 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| U2S85_RS05350 (U2S85_05350) | - | 1021484..1021936 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| U2S85_RS05355 (U2S85_05355) | hemD | 1021933..1022562 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| U2S85_RS05360 (U2S85_05360) | thiE | 1022540..1023172 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| U2S85_RS05365 (U2S85_05365) | thiD | 1023162..1023974 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| U2S85_RS05370 (U2S85_05370) | - | 1023971..1024657 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| U2S85_RS05375 (U2S85_05375) | - | 1024654..1025415 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=913658 U2S85_RS05340 WP_002853046.1 1020526..1020828(+) (ctsT) [Campylobacter jejuni strain PNUSAC038648]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=913658 U2S85_RS05340 WP_002853046.1 1020526..1020828(+) (ctsT) [Campylobacter jejuni strain PNUSAC038648]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |