Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | U2S88_RS05325 | Genome accession | NZ_CP140346 |
| Coordinates | 1022586..1022888 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain PNUSAC039261 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1017586..1027888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U2S88_RS05300 (U2S88_05325) | rpsR | 1017948..1018208 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| U2S88_RS05305 (U2S88_05330) | lon | 1018269..1020644 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| U2S88_RS05310 (U2S88_05335) | - | 1020661..1021308 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| U2S88_RS05315 (U2S88_05340) | fliW | 1021469..1021858 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| U2S88_RS05320 (U2S88_05345) | proC | 1021858..1022589 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| U2S88_RS05325 (U2S88_05350) | ctsT | 1022586..1022888 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| U2S88_RS05330 (U2S88_05355) | - | 1022885..1023547 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| U2S88_RS05335 (U2S88_05360) | - | 1023544..1023996 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| U2S88_RS05340 (U2S88_05365) | hemD | 1023993..1024622 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| U2S88_RS05345 (U2S88_05370) | thiE | 1024600..1025232 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| U2S88_RS05350 (U2S88_05375) | thiD | 1025222..1026034 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| U2S88_RS05355 (U2S88_05380) | - | 1026031..1026717 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| U2S88_RS05360 (U2S88_05385) | - | 1026714..1027475 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=913631 U2S88_RS05325 WP_002853046.1 1022586..1022888(+) (ctsT) [Campylobacter jejuni strain PNUSAC039261]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=913631 U2S88_RS05325 WP_002853046.1 1022586..1022888(+) (ctsT) [Campylobacter jejuni strain PNUSAC039261]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |