Detailed information NTG0913613

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ18_RS21160
• Genome accession: NZ_CP159636
• Coordinates: 4349066..4350091 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z135-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4344066..4355091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ18_RS21130 (ABXJ18_21130)	zapB	4344150..4344395 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABXJ18_RS21135 (ABXJ18_21135)	rraA	4344480..4344965 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ18_RS21140 (ABXJ18_21140)	menA	4345058..4345984 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ18_RS21145 (ABXJ18_21145)	hslU	4346051..4347382 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABXJ18_RS21150 (ABXJ18_21150)	hslV	4347392..4347922 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ18_RS21155 (ABXJ18_21155)	ftsN	4348015..4348974 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ18_RS21160 (ABXJ18_21160)	cytR	4349066..4350091 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ18_RS21165 (ABXJ18_21165)	priA	4350247..4352445 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABXJ18_RS21170 (ABXJ18_21170)	rpmE	4352648..4352860 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ18_RS21175 (ABXJ18_21175)	yiiX	4352921..4353529 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABXJ18_RS21180 (ABXJ18_21180)	metJ	4353589..4353906 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=913613 ABXJ18_RS21160 WP_000644908.1 4349066..4350091(-) (cytR) [Escherichia coli strain Z135-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=913613 ABXJ18_RS21160 WP_000644908.1 4349066..4350091(-) (cytR) [Escherichia coli strain Z135-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625