Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   U3P88_RS14955 Genome accession   NZ_CP140297
Coordinates   3111087..3111251 (+) Length   54 a.a.
NCBI ID   WP_269195032.1    Uniprot ID   -
Organism   Bacillus velezensis strain UMAF6639     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3106087..3116251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U3P88_RS14950 (U3P88_14950) srfAB 3108032..3111022 (+) 2991 Protein_2906 surfactin non-ribosomal peptide synthetase SrfAB -
  U3P88_RS14955 (U3P88_14955) comS 3111087..3111251 (+) 165 WP_269195032.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=913562 U3P88_RS14955 WP_269195032.1 3111087..3111251(+) (comS) [Bacillus velezensis strain UMAF6639]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=913562 U3P88_RS14955 WP_269195032.1 3111087..3111251(+) (comS) [Bacillus velezensis strain UMAF6639]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5