Detailed information NTG0913457

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ45_RS00450
• Genome accession: NZ_CP159635
• Coordinates: 94915..95940 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z135-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 89915..100940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ45_RS00420 (ABXJ45_00420)	zapB	89999..90244 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABXJ45_RS00425 (ABXJ45_00425)	rraA	90329..90814 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ45_RS00430 (ABXJ45_00430)	menA	90907..91833 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ45_RS00435 (ABXJ45_00435)	hslU	91900..93231 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABXJ45_RS00440 (ABXJ45_00440)	hslV	93241..93771 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ45_RS00445 (ABXJ45_00445)	ftsN	93864..94823 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ45_RS00450 (ABXJ45_00450)	cytR	94915..95940 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ45_RS00455 (ABXJ45_00455)	priA	96096..98294 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABXJ45_RS00460 (ABXJ45_00460)	rpmE	98497..98709 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ45_RS00465 (ABXJ45_00465)	yiiX	98770..99378 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABXJ45_RS00470 (ABXJ45_00470)	metJ	99438..99755 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=913457 ABXJ45_RS00450 WP_000644908.1 94915..95940(-) (cytR) [Escherichia coli strain Z135-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=913457 ABXJ45_RS00450 WP_000644908.1 94915..95940(-) (cytR) [Escherichia coli strain Z135-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625