Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   U2873_RS07005 Genome accession   NZ_CP140276
Coordinates   1374937..1375398 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain F7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1369937..1380398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2873_RS06980 (U2873_06980) - 1370342..1371226 (+) 885 WP_017359428.1 cation diffusion facilitator family transporter -
  U2873_RS06985 (U2873_06985) - 1371291..1371443 (-) 153 WP_017367142.1 hypothetical protein -
  U2873_RS06990 (U2873_06990) - 1371744..1372283 (+) 540 WP_007498690.1 RDD family protein -
  U2873_RS06995 (U2873_06995) - 1372408..1373718 (+) 1311 WP_322536370.1 MFS transporter -
  U2873_RS07000 (U2873_07000) - 1373792..1374700 (+) 909 WP_008348035.1 chemotaxis protein -
  U2873_RS07005 (U2873_07005) kre 1374937..1375398 (-) 462 WP_007498684.1 YkyB family protein Regulator
  U2873_RS07010 (U2873_07010) - 1375618..1376514 (-) 897 WP_236810420.1 AraC family transcriptional regulator -
  U2873_RS07015 (U2873_07015) - 1376628..1377572 (+) 945 WP_322536371.1 EamA family transporter -
  U2873_RS07020 (U2873_07020) - 1377729..1377944 (-) 216 WP_008348016.1 hypothetical protein -
  U2873_RS07025 (U2873_07025) - 1378112..1378288 (+) 177 WP_322536372.1 hypothetical protein -
  U2873_RS07030 (U2873_07030) - 1378513..1379790 (-) 1278 WP_008348012.1 MFS transporter -
  U2873_RS07035 (U2873_07035) - 1379864..1380361 (-) 498 WP_035700576.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=913421 U2873_RS07005 WP_007498684.1 1374937..1375398(-) (kre) [Bacillus altitudinis strain F7]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=913421 U2873_RS07005 WP_007498684.1 1374937..1375398(-) (kre) [Bacillus altitudinis strain F7]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771