Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   U2873_RS05665 Genome accession   NZ_CP140276
Coordinates   1129641..1129838 (+) Length   65 a.a.
NCBI ID   WP_108611363.1    Uniprot ID   -
Organism   Bacillus altitudinis strain F7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1124641..1134838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2873_RS05635 (U2873_05635) - 1125041..1125220 (+) 180 WP_008348517.1 YjzC family protein -
  U2873_RS05640 (U2873_05640) - 1125390..1126655 (+) 1266 WP_148780243.1 MFS transporter -
  U2873_RS05645 (U2873_05645) - 1126775..1126969 (-) 195 WP_024720055.1 YjzD family protein -
  U2873_RS05650 (U2873_05650) - 1127182..1127922 (+) 741 WP_007499048.1 hypothetical protein -
  U2873_RS05655 (U2873_05655) - 1127998..1128573 (+) 576 WP_019743124.1 hypothetical protein -
  U2873_RS05660 (U2873_05660) med 1128664..1129629 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  U2873_RS05665 (U2873_05665) comZ 1129641..1129838 (+) 198 WP_108611363.1 ComZ family protein Regulator
  U2873_RS05670 (U2873_05670) - 1129849..1130082 (-) 234 WP_108611364.1 hypothetical protein -
  U2873_RS05675 (U2873_05675) - 1130252..1131190 (+) 939 WP_007499042.1 beta-ketoacyl-ACP synthase III -
  U2873_RS05680 (U2873_05680) fabF 1131212..1132453 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  U2873_RS05685 (U2873_05685) - 1132531..1133325 (+) 795 WP_108611366.1 DUF2268 domain-containing protein -
  U2873_RS05690 (U2873_05690) - 1133496..1134476 (+) 981 WP_035392443.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7317.43 Da        Isoelectric Point: 4.6653

>NTDB_id=913414 U2873_RS05665 WP_108611363.1 1129641..1129838(+) (comZ) [Bacillus altitudinis strain F7]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASKKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=913414 U2873_RS05665 WP_108611363.1 1129641..1129838(+) (comZ) [Bacillus altitudinis strain F7]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAAAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.852

93.846

0.646