Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   U0M98_RS16755 Genome accession   NZ_CP140267
Coordinates   3020232..3020426 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain CACC119     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3015232..3025426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0M98_RS16730 galT 3015297..3016820 (+) 1524 WP_322551726.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  U0M98_RS16735 - 3016863..3017747 (-) 885 WP_237074507.1 NAD(P)-dependent oxidoreductase -
  U0M98_RS16740 - 3017950..3018138 (-) 189 WP_013055400.1 YjzD family protein -
  U0M98_RS16745 - 3018348..3019088 (+) 741 WP_162213622.1 alpha/beta hydrolase -
  U0M98_RS16750 - 3019270..3020154 (+) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  U0M98_RS16755 comZ 3020232..3020426 (+) 195 WP_013081746.1 ComZ family protein Regulator
  U0M98_RS16760 - 3020455..3020655 (-) 201 WP_322551727.1 hypothetical protein -
  U0M98_RS16765 - 3020912..3021850 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  U0M98_RS16770 fabF 3021890..3023131 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  U0M98_RS16775 - 3023238..3024011 (+) 774 WP_060746425.1 DUF2268 domain-containing protein -
  U0M98_RS16780 - 3024238..3025260 (+) 1023 WP_322551728.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=913383 U0M98_RS16755 WP_013081746.1 3020232..3020426(+) (comZ) [Priestia megaterium strain CACC119]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=913383 U0M98_RS16755 WP_013081746.1 3020232..3020426(+) (comZ) [Priestia megaterium strain CACC119]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563