Detailed information NTG0913373

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ19_RS00450
• Genome accession: NZ_CP159634
• Coordinates: 94819..95844 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z135-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 89819..100844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ19_RS00420 (ABXJ19_00420)	zapB	89903..90148 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABXJ19_RS00425 (ABXJ19_00425)	rraA	90233..90718 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ19_RS00430 (ABXJ19_00430)	menA	90811..91737 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ19_RS00435 (ABXJ19_00435)	hslU	91804..93135 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABXJ19_RS00440 (ABXJ19_00440)	hslV	93145..93675 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ19_RS00445 (ABXJ19_00445)	ftsN	93768..94727 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ19_RS00450 (ABXJ19_00450)	cytR	94819..95844 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ19_RS00455 (ABXJ19_00455)	priA	96000..98198 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABXJ19_RS00460 (ABXJ19_00460)	rpmE	98401..98613 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ19_RS00465 (ABXJ19_00465)	yiiX	98674..99282 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABXJ19_RS00470 (ABXJ19_00470)	metJ	99342..99659 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=913373 ABXJ19_RS00450 WP_000644908.1 94819..95844(-) (cytR) [Escherichia coli strain Z135-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=913373 ABXJ19_RS00450 WP_000644908.1 94819..95844(-) (cytR) [Escherichia coli strain Z135-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625