Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   SR852_RS18860 Genome accession   NZ_CP140161
Coordinates   3613864..3614817 (-) Length   317 a.a.
NCBI ID   WP_011197760.1    Uniprot ID   Q65LD8
Organism   Bacillus licheniformis strain ATCC 14580     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3608864..3619817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR852_RS18830 (SR852_18830) - 3608963..3609937 (-) 975 WP_009328843.1 ABC transporter ATP-binding protein -
  SR852_RS18835 (SR852_18835) - 3610129..3610917 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  SR852_RS18840 (SR852_18840) fabF 3611005..3612243 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  SR852_RS18845 (SR852_18845) - 3612265..3613203 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  SR852_RS18850 (SR852_18850) - 3613373..3613615 (+) 243 WP_011197762.1 hypothetical protein -
  SR852_RS18855 (SR852_18855) comZ 3613668..3613853 (-) 186 WP_011197761.1 ComZ family protein Regulator
  SR852_RS18860 (SR852_18860) med 3613864..3614817 (-) 954 WP_011197760.1 BMP family ABC transporter substrate-binding protein Regulator
  SR852_RS18865 (SR852_18865) - 3614902..3615477 (-) 576 WP_011197759.1 hypothetical protein -
  SR852_RS18870 (SR852_18870) - 3615564..3616298 (-) 735 WP_011197758.1 hypothetical protein -
  SR852_RS18875 (SR852_18875) - 3616530..3616724 (+) 195 WP_009328851.1 YjzD family protein -
  SR852_RS18880 (SR852_18880) - 3616795..3616974 (-) 180 WP_003180573.1 YjzC family protein -
  SR852_RS18885 (SR852_18885) - 3617156..3617968 (+) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  SR852_RS18890 (SR852_18890) argF 3618002..3618952 (-) 951 WP_009328852.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35421.10 Da        Isoelectric Point: 4.7166

>NTDB_id=913255 SR852_RS18860 WP_011197760.1 3613864..3614817(-) (med) [Bacillus licheniformis strain ATCC 14580]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=913255 SR852_RS18860 WP_011197760.1 3613864..3614817(-) (med) [Bacillus licheniformis strain ATCC 14580]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65LD8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675