Detailed information NTG0913193

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ42_RS20020
• Genome accession: NZ_CP159628
• Coordinates: 4118450..4119475 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Z217-4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4113450..4124475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ42_RS20000 (ABXJ42_20000)	metJ	4114511..4114828 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABXJ42_RS20005 (ABXJ42_20005)	yiiX	4115012..4115620 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABXJ42_RS20010 (ABXJ42_20010)	rpmE	4115681..4115893 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ42_RS20015 (ABXJ42_20015)	priA	4116096..4118294 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABXJ42_RS20020 (ABXJ42_20020)	cytR	4118450..4119475 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ42_RS20025 (ABXJ42_20025)	ftsN	4119567..4120526 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABXJ42_RS20030 (ABXJ42_20030)	hslV	4120619..4121149 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ42_RS20035 (ABXJ42_20035)	hslU	4121159..4122490 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABXJ42_RS20040 (ABXJ42_20040)	menA	4122557..4123483 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ42_RS20045 (ABXJ42_20045)	rraA	4123576..4124061 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ42_RS20050 (ABXJ42_20050)	zapB	4124146..4124391 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=913193 ABXJ42_RS20020 WP_000644904.1 4118450..4119475(+) (cytR) [Escherichia coli strain Z217-4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=913193 ABXJ42_RS20020 WP_000644904.1 4118450..4119475(+) (cytR) [Escherichia coli strain Z217-4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628