Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SR914_RS11570 Genome accession   NZ_CP140157
Coordinates   2521668..2522072 (+) Length   134 a.a.
NCBI ID   WP_003051508.1    Uniprot ID   A0A5N7WMG8
Organism   Comamonas testosteroni strain DSMZ 14576     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2516668..2527072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR914_RS11545 (SR914_11545) - 2516672..2518156 (+) 1485 WP_003051494.1 amino acid permease -
  SR914_RS11550 (SR914_11550) - 2518295..2518930 (+) 636 WP_003051497.1 DNA-3-methyladenine glycosylase I -
  SR914_RS11555 (SR914_11555) hemL 2519093..2520397 (-) 1305 WP_003051500.1 glutamate-1-semialdehyde 2,1-aminomutase -
  SR914_RS11560 (SR914_11560) thiD 2520381..2521343 (-) 963 WP_148729484.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  SR914_RS11565 (SR914_11565) - 2521464..2521616 (+) 153 WP_034399566.1 rubredoxin -
  SR914_RS11570 (SR914_11570) pilG 2521668..2522072 (+) 405 WP_003051508.1 response regulator Regulator
  SR914_RS11575 (SR914_11575) - 2522072..2522434 (+) 363 WP_003051510.1 response regulator -
  SR914_RS11580 (SR914_11580) - 2522450..2522977 (+) 528 WP_003051512.1 chemotaxis protein CheW -
  SR914_RS11585 (SR914_11585) - 2522997..2525240 (+) 2244 WP_003051514.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14721.99 Da        Isoelectric Point: 6.2600

>NTDB_id=913144 SR914_RS11570 WP_003051508.1 2521668..2522072(+) (pilG) [Comamonas testosteroni strain DSMZ 14576]
MTASAAPLRVLVVDDSNTIRRSAEIFLKQGGYEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPIVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=913144 SR914_RS11570 WP_003051508.1 2521668..2522072(+) (pilG) [Comamonas testosteroni strain DSMZ 14576]
GTGACAGCATCTGCTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAATACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTTACGAGGTTCTTCTGGCCGATGACGGCTTCGATGCCTTGTCCAAGGTCAACGACTACCAGCCGCAGC
TCATCTTCTGCGACATTCTGATGCCCAAGCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCGCGTTTTGCC
AATACGCCCATCGTGATGCTGTCATCCAAGGACGGTGTCTTCGACAAGGCCCGTGGACGCATGGTGGGCTGTCAGGACTA
TCTGACCAAACCCTTCACCAAAGATCAATTGCTGCAAGCCGTACAACAGTTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5N7WMG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.265

87.313

0.5