Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SR882_RS01730 Genome accession   NZ_CP140153
Coordinates   366671..367102 (+) Length   143 a.a.
NCBI ID   WP_322521632.1    Uniprot ID   -
Organism   Guyparkeria halophila strain ATCC 49870     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 361671..372102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR882_RS01710 (SR882_01710) - 362256..363050 (-) 795 WP_322521628.1 energy transducer TonB -
  SR882_RS01715 (SR882_01715) - 363077..364141 (-) 1065 WP_322521629.1 FAD:protein FMN transferase -
  SR882_RS01720 (SR882_01720) gshB 364138..365082 (-) 945 WP_322521630.1 glutathione synthase -
  SR882_RS01725 (SR882_01725) gshA 365108..366475 (-) 1368 WP_322521631.1 glutamate--cysteine ligase -
  SR882_RS01730 (SR882_01730) pilG 366671..367102 (+) 432 WP_322521632.1 response regulator Regulator
  SR882_RS01735 (SR882_01735) - 367182..367544 (+) 363 WP_322521633.1 response regulator -
  SR882_RS01740 (SR882_01740) - 367549..368097 (+) 549 WP_322521634.1 chemotaxis protein CheW -
  SR882_RS01745 (SR882_01745) - 368171..370261 (+) 2091 WP_322521635.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 143 a.a.        Molecular weight: 15447.44 Da        Isoelectric Point: 4.2614

>NTDB_id=913097 SR882_RS01730 WP_322521632.1 366671..367102(+) (pilG) [Guyparkeria halophila strain ATCC 49870]
MEATENHAGLDGLRVMVVDDSKTIRRTADSILSKAGCEVESAIDGFDALARIGAFDPDVVIIDILMPRLDGYQTTALIKN
NDRFGETPIILLSSKDSIFDKARGRIVGASDYLTKPFNSDEILAAVERFAEGRPVADEGAMAD

Nucleotide


Download         Length: 432 bp        

>NTDB_id=913097 SR882_RS01730 WP_322521632.1 366671..367102(+) (pilG) [Guyparkeria halophila strain ATCC 49870]
ATGGAAGCGACAGAGAATCACGCCGGCCTCGACGGCTTGAGGGTCATGGTGGTCGACGATAGCAAGACCATCCGACGGAC
AGCAGACAGCATCCTCAGCAAGGCGGGCTGCGAAGTGGAAAGCGCGATCGACGGATTCGACGCCCTGGCCCGCATCGGCG
CGTTCGATCCGGACGTGGTCATCATCGACATCCTCATGCCGCGTCTCGACGGCTACCAGACCACGGCGCTGATCAAGAAC
AACGATCGCTTCGGCGAGACGCCCATCATCCTGCTGTCCAGCAAGGACAGCATCTTCGACAAGGCGCGTGGCCGCATTGT
CGGTGCCTCCGATTATCTCACCAAGCCCTTCAATAGCGACGAGATTCTCGCCGCGGTCGAGCGTTTCGCGGAAGGTCGCC
CCGTGGCCGACGAAGGCGCGATGGCGGACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.475

82.517

0.483