Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   U1R71_RS04635 Genome accession   NZ_CP140123
Coordinates   905300..906094 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain SJTU2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900300..911094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U1R71_RS04605 (U1R71_04605) sxzA 901140..902171 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  U1R71_RS04610 (U1R71_04610) yfhB 902286..903167 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  U1R71_RS04615 (U1R71_04615) yfhC 903255..903839 (+) 585 WP_033881364.1 nitroreductase -
  U1R71_RS04620 (U1R71_04620) yfhD 903878..904069 (-) 192 WP_014479215.1 YfhD family protein -
  U1R71_RS04625 (U1R71_04625) yfhE 904135..904245 (-) 111 WP_003223230.1 YfhE family protein -
  U1R71_RS04630 (U1R71_04630) yfhF 904300..905211 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  U1R71_RS04635 (U1R71_04635) recX 905300..906094 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  U1R71_RS04640 (U1R71_04640) yfhH 906096..906410 (+) 315 WP_003244592.1 YfhH family protein -
  U1R71_RS04645 (U1R71_04645) yfhI 906553..907746 (+) 1194 WP_003243500.1 MFS transporter -
  U1R71_RS04650 (U1R71_04650) sspK 907778..907930 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  U1R71_RS04655 (U1R71_04655) yfhJ 908055..908324 (+) 270 WP_003243789.1 YfhJ family protein -
  U1R71_RS04660 (U1R71_04660) yfhK 908469..908987 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  U1R71_RS04665 (U1R71_04665) spdL 909072..909404 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  U1R71_RS04670 (U1R71_04670) ephM 909391..910251 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=912901 U1R71_RS04635 WP_014479217.1 905300..906094(+) (recX) [Bacillus subtilis strain SJTU2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=912901 U1R71_RS04635 WP_014479217.1 905300..906094(+) (recX) [Bacillus subtilis strain SJTU2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992