Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   ABII15_RS09780 Genome accession   NZ_CP159534
Coordinates   2102782..2105862 (-) Length   1026 a.a.
NCBI ID   WP_353941890.1    Uniprot ID   A0AAU8IQ77
Organism   Streptomyces sp. HUAS MG91     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2097782..2110862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABII15_RS09755 (ABII15_09755) - 2098214..2099194 (+) 981 WP_353941886.1 hypothetical protein -
  ABII15_RS09760 (ABII15_09760) - 2099228..2099659 (-) 432 WP_353941887.1 Rieske (2Fe-2S) protein -
  ABII15_RS09765 (ABII15_09765) - 2100106..2101047 (+) 942 WP_353947005.1 carbohydrate kinase -
  ABII15_RS09770 (ABII15_09770) - 2101086..2101943 (-) 858 WP_353941888.1 helix-turn-helix transcriptional regulator -
  ABII15_RS09775 (ABII15_09775) - 2102045..2102647 (+) 603 WP_353941889.1 YceI family protein -
  ABII15_RS09780 (ABII15_09780) uvrA 2102782..2105862 (-) 3081 WP_353941890.1 excinuclease ABC subunit UvrA Machinery gene
  ABII15_RS09785 (ABII15_09785) - 2106150..2106875 (+) 726 WP_353941891.1 maleylpyruvate isomerase family mycothiol-dependent enzyme -
  ABII15_RS09790 (ABII15_09790) - 2106885..2107541 (+) 657 WP_353941892.1 MBL fold metallo-hydrolase -
  ABII15_RS09795 (ABII15_09795) - 2107656..2108537 (+) 882 WP_353941893.1 ABC transporter substrate-binding protein -
  ABII15_RS09800 (ABII15_09800) - 2108534..2109415 (+) 882 WP_353941894.1 amino acid ABC transporter permease -
  ABII15_RS09805 (ABII15_09805) - 2109412..2110161 (+) 750 WP_353941895.1 amino acid ABC transporter ATP-binding protein -
  ABII15_RS09810 (ABII15_09810) aroQ 2110168..2110641 (-) 474 WP_353941896.1 type II 3-dehydroquinate dehydratase -

Sequence

Protein


Download         Length: 1026 a.a.        Molecular weight: 112157.61 Da        Isoelectric Point: 8.4427

>NTDB_id=912692 ABII15_RS09780 WP_353941890.1 2102782..2105862(-) (uvrA) [Streptomyces sp. HUAS MG91]
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSSYARQFLGQMDKPDVDFIEGL
SPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPHCPECGRPIARQSPQAIVDKVLELPEGSRFQVLSPLVRERK
GEFLDLFSDLQTKGYSRARVDGQTIQLSEPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPHDDLSFEELEPRSFSFNSPFGACPDCSGIGTRMEVDPELIVPDEDKSLDEGAIHPWSHGHTK
DYFGRLIGALADALGFRTDIPFAGLPQRAKKALIYGHKTQIEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRE
RFEGYMREVPCPTCEGTRLKPIVLAVTVMDKSIAEVSAMSISDCADFLSKLTLNARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLRDMGNTLIVVEHDEDTIKVAD
WIVDIGPGAGEHGGKVVHSGPLKELLKNAESMTGQYLSGKRAIPIPDLRRPVDPGRRLTVHGAKENNLRDIDVSFPLGVL
TAVTGVSGSGKSTLVNDILYTHLARELNGARTVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLDVHYKGKSIAEVLDMPIEEA
LGFFEAVPGIARHLKTLNDVGLGYVRLGQSAPTLSGGEAQRVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLS
GLVDKGNSVIVIEHNLDVIKTADWVIDMGPEGGNGGGIVVAEGTPEEVAAVPASHTGKFLRDILGADRVSDAPVPATRAR
KTAAKKTVAAGKAPAKKATTAKTATKSATKSSSTRNAASTAKKAAPAKSATKKTAAKKTTGRARKA

Nucleotide


Download         Length: 3081 bp        

>NTDB_id=912692 ABII15_RS09780 WP_353941890.1 2102782..2105862(-) (uvrA) [Streptomyces sp. HUAS MG91]
GTGGCCGACCGTCTCATCGTCCGTGGCGCGCGCGAGCACAATCTCCGGAATGTCTCGCTCGACCTCCCGCGCGACTCCCT
CATCGTCTTCACCGGTCTGTCCGGCTCCGGCAAGTCCTCGCTCGCGTTCGACACGATCTTCGCCGAGGGCCAGCGCCGGT
ACGTCGAGTCGCTGTCCTCGTACGCCCGTCAGTTCCTCGGCCAGATGGACAAGCCGGACGTCGACTTCATCGAGGGCCTG
TCGCCGGCCGTCTCGATCGACCAGAAGTCGACGTCGCGCAACCCGCGCTCCACGGTCGGCACCATCACCGAGGTCTACGA
CTACCTGCGACTGCTCTTCGCGCGCATCGGCAAGCCGCACTGCCCCGAGTGCGGCCGCCCCATCGCGCGCCAGTCGCCGC
AGGCCATCGTCGACAAGGTCCTCGAGCTGCCCGAGGGCAGCCGCTTCCAGGTCCTGTCCCCGCTGGTGCGCGAGCGCAAG
GGCGAGTTCCTCGACCTCTTCAGCGACCTGCAGACCAAGGGCTACTCCCGCGCGCGCGTGGACGGCCAGACGATCCAGCT
CTCCGAGCCGCCGACCCTGAAGAAGCAGGAGAAGCACACCATCGAGGTGGTCGTCGACCGCCTCACGGTGAAGGACTCCG
CCAAGCGCCGCCTGACCGACTCCGTCGAGACCGCGCTGGGCCTGTCCGGCGGCATGGTCGTGCTCGACTTCGTCGACCTC
CCCGAGGACGACCCCGAGCGCGAGCGCATGTACTCGGAGCACCTGTACTGCCCGCACGACGACCTGTCCTTCGAAGAGCT
GGAGCCGCGCTCCTTCTCCTTCAACTCGCCCTTCGGCGCCTGCCCCGACTGCTCGGGCATCGGTACGCGCATGGAGGTCG
ACCCCGAGCTGATCGTTCCCGACGAGGACAAGTCGCTCGACGAGGGCGCCATCCACCCCTGGTCGCACGGCCACACCAAG
GACTACTTCGGCCGCCTCATCGGGGCGCTCGCCGACGCCCTCGGCTTCCGTACGGACATCCCGTTCGCCGGACTGCCGCA
GCGCGCCAAGAAGGCGCTGATCTACGGCCACAAGACCCAGATCGAGGTCCGCTACCGCAACCGGTACGGGCGCGAGCGCG
TCTACACGACGCCCTTCGAGGGCGCCGTGCCGTTCGTCAAGCGCCGCCACAGCGAGGCCGAGTCGGACGCGAGCCGCGAG
CGCTTCGAGGGCTACATGCGCGAGGTGCCCTGCCCGACCTGTGAGGGCACGCGCCTCAAGCCGATCGTGCTGGCCGTCAC
CGTCATGGACAAGTCGATCGCCGAGGTCTCGGCGATGTCCATCAGCGACTGCGCCGACTTCCTCAGCAAGCTGACGCTGA
ACGCGCGCGACAAGAAGATCGCCGAGCGCGTCCTGAAGGAGGTCAACGAGCGGCTGCGGTTCCTCGTCGACGTGGGCCTC
GACTATCTGTCACTGAACCGGGCGGCGGGCACCCTCTCCGGTGGCGAGGCCCAGCGCATCCGCCTCGCCACGCAGATCGG
CTCCGGTCTCGTCGGCGTGCTGTACGTCCTGGACGAGCCGTCCATCGGTCTCCACCAGCGCGACAACCACCGCCTCATCG
AGACACTGGTCCGCCTGCGCGACATGGGCAACACGCTCATCGTGGTCGAGCACGACGAGGACACCATCAAGGTCGCCGAC
TGGATCGTCGACATCGGCCCCGGCGCGGGTGAGCACGGCGGCAAGGTCGTGCACAGCGGCCCGTTGAAGGAGCTGCTGAA
GAACGCCGAGTCGATGACCGGCCAGTACCTGTCGGGCAAGCGGGCCATCCCGATCCCGGACCTGCGGCGCCCGGTGGACC
CGGGCCGACGCCTGACGGTGCACGGCGCCAAGGAGAACAACCTGCGGGACATCGACGTGTCCTTCCCGCTGGGCGTCCTC
ACGGCCGTCACCGGCGTCTCGGGATCGGGCAAGTCGACGCTGGTCAACGACATCCTGTACACGCACCTGGCACGCGAGCT
GAACGGCGCGCGCACGGTCCCCGGCCGGCACACGCGCGTGGACGGCGACGACCTCGTCGACAAGGTCGTGCACGTCGACC
AGTCGCCGATCGGCCGCACCCCGCGGTCGAACCCGGCGACGTACACCGGCGTCTTCGACCACGTCCGCAAGCTGTTCGCC
GAGACGACCGAGGCGAAGGTCCGCGGCTACCTGCCCGGACGCTTCTCCTTCAACGTCAAGGGCGGCCGCTGCGAGAACTG
CTCGGGCGACGGCACGATCAAGATCGAGATGAACTTCCTGCCGGACGTGTACGTCCCGTGCGAGGTCTGCCACGGCGCCC
GGTACAACCGGGAGACGCTGGACGTCCACTACAAGGGCAAGTCCATCGCCGAGGTCCTGGACATGCCGATCGAGGAGGCG
CTGGGCTTCTTCGAGGCGGTGCCCGGCATCGCCCGTCACCTCAAGACGCTGAACGACGTGGGTCTCGGATACGTCCGCCT
CGGCCAGTCCGCGCCGACCCTGTCCGGCGGTGAGGCGCAGCGCGTGAAGCTCGCCAGCGAGCTGCAGAAGCGTTCCACGG
GACGCACCGTCTACGTGCTCGACGAGCCGACGACGGGTCTGCACTTCGAGGACATCAGCAAGCTGATCACGGTGCTCTCG
GGCCTCGTCGACAAGGGCAACTCGGTCATCGTCATCGAGCACAACCTCGACGTCATCAAGACCGCGGACTGGGTCATCGA
CATGGGCCCCGAGGGGGGCAACGGCGGCGGCATCGTCGTCGCCGAGGGCACCCCGGAGGAGGTCGCGGCGGTGCCTGCCA
GCCACACCGGCAAGTTCCTGCGCGACATCCTCGGCGCCGACCGGGTCAGCGATGCCCCGGTGCCCGCGACGCGCGCCCGC
AAGACCGCCGCGAAGAAGACGGTGGCGGCGGGCAAGGCCCCGGCGAAGAAAGCGACGACGGCGAAGACCGCGACCAAGTC
GGCCACCAAGTCGTCGTCCACGCGCAATGCCGCTTCGACGGCCAAGAAGGCGGCGCCGGCCAAGTCGGCGACCAAGAAGA
CCGCCGCGAAGAAGACGACCGGCAGGGCTCGAAAGGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(628-864)

UvrA DNA-binding domain (UvrA_DNA-bind)

(294-403)

UvrA interaction domain (UvrA_inter)

(131-238)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAU8IQ77

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

57.143

92.105

0.526
  uvrA Streptococcus pneumoniae TIGR4

57.143

92.105

0.526
  uvrA Streptococcus pneumoniae D39

57.143

92.105

0.526