Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   ABII15_RS00765 Genome accession   NZ_CP159534
Coordinates   155317..156012 (-) Length   231 a.a.
NCBI ID   WP_353940258.1    Uniprot ID   A0AAU8IK47
Organism   Streptomyces sp. HUAS MG91     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 150317..161012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABII15_RS00745 (ABII15_00745) - 151125..152681 (-) 1557 WP_353940255.1 MFS transporter -
  ABII15_RS00750 (ABII15_00750) - 152682..153506 (-) 825 WP_353940256.1 TauD/TfdA family dioxygenase -
  ABII15_RS00755 (ABII15_00755) - 153503..153789 (-) 287 Protein_150 hypothetical protein -
  ABII15_RS00760 (ABII15_00760) - 154252..155226 (+) 975 WP_353940257.1 aldo/keto reductase -
  ABII15_RS00765 (ABII15_00765) vraR 155317..156012 (-) 696 WP_353940258.1 response regulator transcription factor Regulator
  ABII15_RS00770 (ABII15_00770) - 156036..157238 (-) 1203 WP_353940259.1 histidine kinase -
  ABII15_RS00775 (ABII15_00775) - 157381..157575 (+) 195 WP_353940260.1 hypothetical protein -
  ABII15_RS00780 (ABII15_00780) - 157572..158735 (+) 1164 WP_353940261.1 glycosyltransferase family 4 protein -
  ABII15_RS00785 (ABII15_00785) - 158858..159214 (-) 357 WP_353940262.1 hypothetical protein -
  ABII15_RS00790 (ABII15_00790) - 159435..159815 (+) 381 WP_353940263.1 tautomerase family protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 24923.47 Da        Isoelectric Point: 5.8473

>NTDB_id=912673 ABII15_RS00765 WP_353940258.1 155317..156012(-) (vraR) [Streptomyces sp. HUAS MG91]
MIRALVADDQAIVRTGFVNLLNTQEDIEVVGEAEDGEQAVHIAARTRPDLALLDIRMPHKNGIEAAREILAASDGATKVL
MLTTFGLDEYVYDALAAGAGGFLLKDATFPELLHAVRVVAAGNALLSPEITKRVIGEFVHARASRLPVHSAADLTARETE
VLTLIARGLSNAEIAGRLTITDHTVKTHINRLFAKLELRDRAQAVIAAYEWGLVRAGGGADREHENRLNAL

Nucleotide


Download         Length: 696 bp        

>NTDB_id=912673 ABII15_RS00765 WP_353940258.1 155317..156012(-) (vraR) [Streptomyces sp. HUAS MG91]
GTGATCAGGGCACTGGTCGCCGACGATCAGGCGATCGTCCGCACCGGGTTCGTCAACCTCCTCAACACCCAGGAGGACAT
CGAGGTCGTCGGCGAAGCCGAGGACGGTGAACAGGCCGTGCACATCGCCGCCAGGACGCGGCCCGATCTCGCCCTCCTCG
ACATTCGGATGCCGCACAAGAACGGCATCGAGGCCGCCCGCGAGATCCTGGCCGCCTCCGACGGCGCGACGAAAGTCCTG
ATGCTCACGACCTTCGGGCTCGACGAGTACGTGTACGACGCCCTCGCGGCCGGGGCGGGCGGCTTTCTCCTCAAGGACGC
CACCTTCCCCGAACTGCTGCACGCGGTGCGGGTGGTGGCCGCCGGGAACGCGCTGCTCTCGCCCGAGATCACCAAGCGGG
TGATCGGCGAGTTCGTGCACGCGCGGGCCTCACGGCTGCCGGTCCATTCCGCGGCCGACCTCACGGCACGTGAGACCGAG
GTGCTCACCTTGATCGCCCGGGGGCTGTCCAACGCGGAGATCGCGGGCCGACTCACGATCACGGATCACACCGTGAAGAC
CCATATCAACCGGCTGTTCGCGAAACTGGAGCTGCGGGACCGCGCACAAGCCGTCATCGCGGCCTACGAGTGGGGTCTGG
TGCGGGCGGGTGGCGGCGCCGACCGAGAGCACGAAAATCGGCTCAATGCCCTATGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(154-207)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAU8IK47

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

40.654

92.641

0.377