Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | L6411_RS08865 | Genome accession | NZ_AP025333 |
| Coordinates | 1848537..1850987 (-) | Length | 816 a.a. |
| NCBI ID | WP_155962370.1 | Uniprot ID | - |
| Organism | Streptococcus ruminantium strain GUT-189 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1843537..1855987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6411_RS08850 (GUT189_17160) | hslO | 1845571..1846437 (+) | 867 | WP_155971563.1 | Hsp33 family molecular chaperone HslO | - |
| L6411_RS08855 (GUT189_17170) | dusB | 1846430..1847437 (+) | 1008 | WP_120172272.1 | tRNA dihydrouridine synthase DusB | - |
| L6411_RS08860 (GUT189_17180) | - | 1847724..1848218 (-) | 495 | WP_237374097.1 | adenylyltransferase/cytidyltransferase family protein | - |
| L6411_RS08865 (GUT189_17190) | clpC | 1848537..1850987 (-) | 2451 | WP_155962370.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| L6411_RS08870 (GUT189_17200) | - | 1850993..1851451 (-) | 459 | WP_024531809.1 | CtsR family transcriptional regulator | - |
| L6411_RS08875 (GUT189_17210) | - | 1851594..1851932 (+) | 339 | WP_237374099.1 | thioredoxin domain-containing protein | - |
| L6411_RS08880 (GUT189_17220) | - | 1851932..1852633 (+) | 702 | WP_155995731.1 | GNAT family acetyltransferase | - |
| L6411_RS08885 (GUT189_17230) | tsf | 1852788..1853828 (-) | 1041 | WP_237374100.1 | translation elongation factor Ts | - |
| L6411_RS08890 (GUT189_17240) | rpsB | 1853987..1854763 (-) | 777 | WP_024531813.1 | 30S ribosomal protein S2 | - |
| L6411_RS08900 (GUT189_17250) | nusG | 1855218..1855757 (-) | 540 | WP_024531814.1 | transcription termination/antitermination protein NusG | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90603.29 Da Isoelectric Point: 7.0626
>NTDB_id=91258 L6411_RS08865 WP_155962370.1 1848537..1850987(-) (clpC) [Streptococcus ruminantium strain GUT-189]
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGST
LKVGVKGAQIRFDIVN
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGST
LKVGVKGAQIRFDIVN
Nucleotide
Download Length: 2451 bp
>NTDB_id=91258 L6411_RS08865 WP_155962370.1 1848537..1850987(-) (clpC) [Streptococcus ruminantium strain GUT-189]
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTTGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTACCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGACCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCCTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAAGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTAACAGAAAGTCATATGCAGGATGTTGTCAAGGTTATGGTACAGCCTTTGATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTCAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTTGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTACCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGACCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCCTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAAGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTAACAGAAAGTCATATGCAGGATGTTGTCAAGGTTATGGTACAGCCTTTGATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTCAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
69.448 |
99.877 |
0.694 |
| clpC | Streptococcus pneumoniae Rx1 |
69.448 |
99.877 |
0.694 |
| clpC | Streptococcus pneumoniae D39 |
69.448 |
99.877 |
0.694 |
| clpC | Streptococcus mutans UA159 |
65.725 |
99.755 |
0.656 |
| clpC | Streptococcus thermophilus LMD-9 |
64.409 |
99.51 |
0.641 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.409 |
99.51 |
0.641 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.619 |
100 |
0.496 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.154 |
100 |
0.433 |
| clpE | Streptococcus mutans UA159 |
46.603 |
77.574 |
0.362 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.511 |
79.167 |
0.36 |