Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   L6411_RS08305 Genome accession   NZ_AP025333
Coordinates   1729694..1730428 (-) Length   244 a.a.
NCBI ID   WP_120172160.1    Uniprot ID   A0A2Z5TPY8
Organism   Streptococcus ruminantium strain GUT-189     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724694..1735428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6411_RS08275 (GUT189_15980) rnpM 1724788..1725084 (-) 297 WP_024531898.1 RNase P modulator RnpM -
  L6411_RS08280 (GUT189_15990) nusA 1725101..1726243 (-) 1143 WP_024531897.1 transcription termination factor NusA -
  L6411_RS08285 (GUT189_16000) rimP 1726313..1726783 (-) 471 WP_024531896.1 ribosome maturation factor RimP -
  L6411_RS08290 (GUT189_16010) trmB 1727175..1727810 (-) 636 WP_237374059.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  L6411_RS08295 (GUT189_16020) ccrZ 1727807..1728601 (-) 795 WP_024531894.1 cell cycle regulator CcrZ -
  L6411_RS08300 (GUT189_16030) - 1728651..1729697 (-) 1047 WP_237374060.1 ABC transporter permease -
  L6411_RS08305 (GUT189_16040) pptA 1729694..1730428 (-) 735 WP_120172160.1 ABC transporter ATP-binding protein Regulator
  L6411_RS08310 (GUT189_16050) - 1730491..1730904 (+) 414 WP_120172162.1 HIT family protein -
  L6411_RS08315 (GUT189_16060) - 1730906..1731199 (+) 294 WP_024531890.1 hypothetical protein -
  L6411_RS08320 (GUT189_16070) - 1731249..1732445 (-) 1197 WP_024531889.1 LCP family protein -
  L6411_RS08325 (GUT189_16080) - 1732442..1732969 (-) 528 WP_237374062.1 GNAT family N-acetyltransferase -
  L6411_RS08330 (GUT189_16090) tsaE 1732962..1733402 (-) 441 WP_336512684.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  L6411_RS08335 (GUT189_16100) - 1733634..1735298 (-) 1665 WP_024531886.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27177.51 Da        Isoelectric Point: 4.4958

>NTDB_id=91253 L6411_RS08305 WP_120172160.1 1729694..1730428(-) (pptA) [Streptococcus ruminantium strain GUT-189]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQILIDGQSLTQDAEHYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLNWEQAWNRAERLLNIFRLDEKLDWFPVHFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAIADLLALLEEEKAKGTSILMSTHVLDSAEKMCDRFVILHQGQVRAAGNLAELQATFAMEEASLSDIYLALTQE
GVVR

Nucleotide


Download         Length: 735 bp        

>NTDB_id=91253 L6411_RS08305 WP_120172160.1 1729694..1730428(-) (pptA) [Streptococcus ruminantium strain GUT-189]
ATGTTAGAAGTAAAAAATGTCACAGGTGGCTATGTAAATATCCCTGTCTTGAAAGATGTATCTTTTACAGTTGAAGATGG
ACAGTTGGTCGGCTTAATCGGTCTTAATGGTGCTGGAAAATCAACTACCATAAAAGAAATTATCGGCCTTTTGACACCCT
ATCAAGGACAGATTTTGATTGATGGCCAAAGCCTGACACAGGATGCAGAACATTATCGAAAAAAGATTGGTTTTATCCCA
GAAACGCCTAGTTTATACGAGGAGCTAACTCTCAAAGAACATTTGGAAGTTGTTGCTATGGCTTATGATTTGAATTGGGA
GCAGGCTTGGAACCGAGCAGAACGGTTGCTGAATATTTTTCGTCTGGACGAAAAGTTGGATTGGTTCCCTGTTCATTTTT
CAAAAGGAATGAAGCAAAAAGTGATGATTATCTGTGCATTTATGGTAGAACCAAGCCTGTTGATCGTTGACGAGCCTTTT
TTAGGTTTGGATCCGGTAGCTATTGCCGATTTGCTTGCTCTCCTAGAGGAAGAAAAAGCAAAGGGGACTTCTATCTTGAT
GTCAACGCATGTTCTGGATTCGGCTGAAAAAATGTGTGATCGGTTTGTTATTCTCCACCAAGGGCAGGTACGAGCAGCTG
GAAATTTGGCTGAGCTACAGGCAACTTTTGCTATGGAAGAGGCCAGTCTCAGTGATATTTATCTTGCCTTGACGCAAGAG
GGAGTGGTCAGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z5TPY8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.222

97.951

0.717
  pptA Streptococcus thermophilus LMD-9

72.385

97.951

0.709

Multiple sequence alignment