Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   L6411_RS02910 Genome accession   NZ_AP025333
Coordinates   583149..584153 (+) Length   334 a.a.
NCBI ID   WP_024532092.1    Uniprot ID   A0A2Z5TP60
Organism   Streptococcus ruminantium strain GUT-189     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 578149..589153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6411_RS02900 (GUT189_05240) - 578504..581281 (+) 2778 WP_237374369.1 MucBP domain-containing protein -
  L6411_RS02905 (GUT189_05250) - 581854..582939 (-) 1086 WP_024532093.1 M24 family metallopeptidase -
  L6411_RS02910 (GUT189_05260) ccpA 583149..584153 (+) 1005 WP_024532092.1 catabolite control protein A Regulator
  L6411_RS02915 (GUT189_05270) - 584248..585282 (+) 1035 WP_120171452.1 glycosyltransferase family 4 protein -
  L6411_RS02920 (GUT189_05280) - 585295..586608 (+) 1314 WP_155964460.1 glycosyltransferase family 4 protein -
  L6411_RS02925 (GUT189_05290) thrS 587143..589089 (+) 1947 WP_155961914.1 threonine--tRNA ligase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36845.05 Da        Isoelectric Point: 5.5207

>NTDB_id=91233 L6411_RS02910 WP_024532092.1 583149..584153(+) (ccpA) [Streptococcus ruminantium strain GUT-189]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAVASTDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKENGIEFNEGLVFESKYKYEEGYALAERVLNA
GATAAYVAEDEIAAGLLNGISDMGIKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VILNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=91233 L6411_RS02910 WP_024532092.1 583149..584153(+) (ccpA) [Streptococcus ruminantium strain GUT-189]
ATGTTAAACACTGACGATACGGTAACGATTTATGATGTTGCCCGCGAAGCTGGTGTATCCATGGCGACTGTGTCGCGCGT
GGTAAACGGAAATAAGAATGTAAAGGAAAACACCCGTAAAAAGGTATTAGAAGTTATTGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCGCGTGGTTTGGCCAGCAAGAAGACGACCACTGTTGGGGTCGTGATTCCAAATATTGCAAATGCCTATTTT
GCGACTCTGGCTAAAGGAATTGATGATATTGCGGATATGTATAAGTACAATATTGTCCTTGCTAACAGTGATGAGAATGA
CGAAAAAGAAATCAACGTGGTCAATACTTTATTTTCAAAACAGGTGGACGGCATCATTTTCATGGGCTACCACTTGACAG
ACAAGATTCGTGCAGAATTCTCCCGTTCACGAACTCCGATTGTCCTAGCTGGTACCGTGGATTTGGAGCACCAGTTGCCA
AGTGTCAATATTGACTACGCTGTTGCTAGTACGGATGCAGTGAACCTTCTTGCAAAGAATAATAAAAAAATCGCCTTTGT
ATCTGGTCCACTCGTTGATGACATCAATGGAAAAGTTCGTTTTGCTGGTTATAAGCAAGGATTAAAAGAAAATGGGATTG
AGTTCAATGAAGGTTTAGTCTTTGAATCTAAGTATAAGTACGAAGAAGGCTATGCTCTTGCAGAGCGTGTCTTAAATGCT
GGGGCTACCGCTGCCTATGTTGCCGAGGATGAAATTGCAGCAGGTCTATTGAACGGCATCAGTGATATGGGAATCAAAGT
TCCTGAAGATTTTGAAATCATCACCAGTGATGACTCTCTCGTTACTAAATTTACCCGTCCAAACCTGACATCTATCAATC
AACCACTTTATGATATTGGTGCTATTGCTATGCGCATGCTGACAAAAATCATGCACAAGGAAGAGTTGGAAAATCGTGAA
GTGATTTTGAACCACGGTATAAAGGTTCGCAAATCAACGAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z5TP60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

99.701

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

99.701

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.912

99.102

0.584

Multiple sequence alignment