Detailed information NTG0912057

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: U0036_RS01475
• Genome accession: NZ_CP139967
• Coordinates: 314248..315381 (-)
• Length: 377 a.a.
• NCBI ID: WP_063236665.1
• Uniprot ID: A0A375G7N2
• Organism: Cupriavidus oxalaticus strain HAMBI_2164
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 309248..320381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0036_RS01455 (U0036_01460)	-	310038..311378 (-)	1341	WP_063236662.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
U0036_RS01460 (U0036_01465)	-	311766..312401 (-)	636	WP_063236750.1	ANTAR domain-containing response regulator	-
U0036_RS01465 (U0036_01470)	-	312645..313346 (+)	702	WP_063236663.1	fumarylacetoacetate hydrolase family protein	-
U0036_RS01470 (U0036_01475)	maiA	313351..313998 (+)	648	WP_063236664.1	maleylacetoacetate isomerase	-
U0036_RS01475 (U0036_01480)	pilA	314248..315381 (-)	1134	WP_063236665.1	signal recognition particle-docking protein FtsY	Machinery gene
U0036_RS01480 (U0036_01485)	-	315609..317147 (+)	1539	WP_063236666.1	M16 family metallopeptidase	-
U0036_RS01485 (U0036_01490)	-	317157..318548 (+)	1392	WP_063236667.1	M16 family metallopeptidase	-
U0036_RS01490 (U0036_01495)	rsmD	318649..319383 (+)	735	WP_174544826.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
U0036_RS01495 (U0036_01500)	coaD	319623..320108 (+)	486	WP_029046761.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40129.61 Da
• Isoelectric Point: 7.3627

>NTDB_id=912057 U0036_RS01475 WP_063236665.1 314248..315381(-) (pilA) [Cupriavidus oxalaticus strain HAMBI_2164]
MFSFWKKRKAEPASVETPAPAPAPTPTPAPAPAPVPVPTPTPVPAQVPPPAPAPVAAPEPAAAIETLELVPAPAISAEAR
QGWMHRLRTGLSKTSRNIGTLFVGVKVDEALFEELETALLMADAGVEATEYLLAELRKRVRSERIESAEGVKAALKALLT
DLLRPLEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQRYDQKVLLAAGDTFRAAAREQLTIWGERNNVTVVAQES
GDPAAVIFDAVNAAKARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNALQQTRAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFAEALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=912057 U0036_RS01475 WP_063236665.1 314248..315381(-) (pilA) [Cupriavidus oxalaticus strain HAMBI_2164]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCCGCGTCCGTCGAGACGCCAGCCCCGGCGCCCGCGCCCACCCCCAC
GCCAGCCCCGGCCCCCGCTCCGGTTCCGGTCCCGACGCCGACACCGGTCCCCGCACAGGTGCCGCCCCCGGCGCCGGCCC
CGGTGGCCGCACCCGAACCAGCCGCTGCCATCGAAACGCTTGAACTGGTCCCTGCGCCCGCCATCAGCGCCGAAGCGCGT
CAGGGCTGGATGCACCGACTGCGCACTGGCCTGTCCAAGACCAGCCGCAACATCGGCACGCTGTTCGTCGGCGTCAAGGT
CGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGACGCGGGCGTGGAAGCCACCGAATACCTGCTCG
CCGAGCTGCGCAAGCGGGTCAGGTCCGAGCGCATCGAATCGGCCGAAGGCGTCAAGGCCGCGCTCAAGGCGCTGCTGACC
GACCTGCTGCGTCCGCTGGAAAAAACCATGGCGCTGGGCCGCGAGCAGCCGCTGGTGATGATGATCGCGGGCGTCAACGG
CGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGCGCTACGACCAGAAGGTGCTGCTGGCCGCCGGCG
ACACCTTCCGCGCCGCCGCGCGCGAACAGCTGACGATCTGGGGCGAGCGCAACAACGTCACCGTGGTGGCGCAGGAAAGC
GGCGACCCCGCCGCGGTGATCTTCGACGCGGTGAATGCGGCCAAGGCGCGCGGCATCGACATCGTGATGGCCGATACCGC
CGGCCGCCTGCCGACGCAGCTGCACCTGATGGAGGAGCTGAAGAAGGTCAAGCGCGTCATCAGCAAGGCCATGCCGACCG
CGCCGCATGAGGTGCTGCTGGTGATCGACGCCAATACCGGCCAGAACGCGCTGCAGCAGACGCGAGCCTTCGATGATGCG
CTGGGGCTGACCGGCCTGATCGTGACCAAGCTGGATGGGACTGCCAAGGGCGGCATCCTGGCGGCGATCGCGCGCCAGCG
CCCGGTGCCGGTGTACTTCATCGGCGTAGGCGAGAAGGTCGAGGACCTGCAGCCATTCAAGGCCGAGGAATTCGCGGAAG
CGCTGCTGGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (178-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (102-157)

3D structure

• AlphaFold DB: A0A375G7N2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.952	100	0.568