Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | L6419_RS08670 | Genome accession | NZ_AP025332 |
| Coordinates | 1834305..1836755 (-) | Length | 816 a.a. |
| NCBI ID | WP_237375348.1 | Uniprot ID | - |
| Organism | Streptococcus ruminantium strain GUT-184 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1829305..1841755
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6419_RS08655 (GUT184_16740) | hslO | 1831345..1832211 (+) | 867 | WP_237375347.1 | Hsp33 family molecular chaperone HslO | - |
| L6419_RS08660 (GUT184_16750) | dusB | 1832204..1833211 (+) | 1008 | WP_120172272.1 | tRNA dihydrouridine synthase DusB | - |
| L6419_RS08665 (GUT184_16760) | - | 1833492..1833986 (-) | 495 | WP_024531807.1 | adenylyltransferase/cytidyltransferase family protein | - |
| L6419_RS08670 (GUT184_16770) | clpC | 1834305..1836755 (-) | 2451 | WP_237375348.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| L6419_RS08675 (GUT184_16780) | - | 1836761..1837219 (-) | 459 | WP_024531809.1 | CtsR family transcriptional regulator | - |
| L6419_RS08680 (GUT184_16790) | - | 1837362..1837700 (+) | 339 | WP_024531810.1 | thioredoxin domain-containing protein | - |
| L6419_RS08685 (GUT184_16800) | - | 1837700..1838401 (+) | 702 | WP_155995731.1 | GNAT family acetyltransferase | - |
| L6419_RS08690 (GUT184_16810) | tsf | 1838556..1839596 (-) | 1041 | WP_024531812.1 | translation elongation factor Ts | - |
| L6419_RS08695 (GUT184_16820) | rpsB | 1839900..1840676 (-) | 777 | WP_024531813.1 | 30S ribosomal protein S2 | - |
| L6419_RS08705 (GUT184_16830) | nusG | 1841131..1841670 (-) | 540 | WP_024531814.1 | transcription termination/antitermination protein NusG | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90631.30 Da Isoelectric Point: 7.0627
>NTDB_id=91205 L6419_RS08670 WP_237375348.1 1834305..1836755(-) (clpC) [Streptococcus ruminantium strain GUT-184]
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGST
LKVGVKGAQIRFDIVN
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGST
LKVGVKGAQIRFDIVN
Nucleotide
Download Length: 2451 bp
>NTDB_id=91205 L6419_RS08670 WP_237375348.1 1834305..1836755(-) (clpC) [Streptococcus ruminantium strain GUT-184]
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTTGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTACCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGGCCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCCTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAGGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTAACAGAAAGTCATATGCAGGATGTTGTCAAGGTTATGGTACAGCCATTAATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTCAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTTGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTACCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGGCCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCCTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAGGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTAACAGAAAGTCATATGCAGGATGTTGTCAAGGTTATGGTACAGCCATTAATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTCAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus pneumoniae Rx1 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus pneumoniae D39 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus mutans UA159 |
65.848 |
99.755 |
0.657 |
| clpC | Streptococcus thermophilus LMD-9 |
64.532 |
99.51 |
0.642 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.532 |
99.51 |
0.642 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.499 |
100 |
0.495 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.032 |
100 |
0.431 |
| clpE | Streptococcus mutans UA159 |
46.603 |
77.574 |
0.362 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.511 |
79.167 |
0.36 |