Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U0039_RS18235 Genome accession   NZ_CP139964
Coordinates   3844313..3844714 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain HAMBI_2659     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3839313..3849714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0039_RS18220 (U0039_18215) - 3841324..3843360 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  U0039_RS18225 (U0039_18220) - 3843402..3843932 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  U0039_RS18230 (U0039_18225) - 3843932..3844294 (-) 363 WP_005410717.1 response regulator -
  U0039_RS18235 (U0039_18230) pilG 3844313..3844714 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  U0039_RS18240 (U0039_18235) gshB 3844955..3845902 (+) 948 WP_024958137.1 glutathione synthase -
  U0039_RS18245 (U0039_18240) - 3845902..3846786 (+) 885 WP_005410719.1 energy transducer TonB -
  U0039_RS18250 (U0039_18245) tsaB 3847362..3848075 (-) 714 WP_024958691.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=912030 U0039_RS18235 WP_005418455.1 3844313..3844714(-) (pilG) [Stenotrophomonas maltophilia strain HAMBI_2659]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=912030 U0039_RS18235 WP_005418455.1 3844313..3844714(-) (pilG) [Stenotrophomonas maltophilia strain HAMBI_2659]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677