Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | U0544_RS13315 | Genome accession | NZ_CP139944 |
| Coordinates | 2622898..2623278 (+) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain CARB128 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2617898..2628278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U0544_RS13285 (U0544_13330) | kdsB | 2618804..2619565 (+) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| U0544_RS13290 (U0544_13335) | holB | 2619579..2620559 (+) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| U0544_RS13295 (U0544_13340) | pilZ | 2620570..2620911 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| U0544_RS13300 (U0544_13345) | ycfH | 2620929..2621702 (+) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| U0544_RS13305 (U0544_13350) | - | 2621739..2622347 (+) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| U0544_RS13310 (U0544_13355) | - | 2622354..2622908 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| U0544_RS13315 (U0544_13360) | xcpV | 2622898..2623278 (+) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| U0544_RS13320 (U0544_13365) | xcpW | 2623278..2624093 (+) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| U0544_RS13325 (U0544_13370) | gspK | 2624094..2625053 (+) | 960 | WP_002121457.1 | type II secretion system minor pseudopilin GspK | - |
| U0544_RS13330 (U0544_13375) | - | 2625281..2625877 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| U0544_RS13335 (U0544_13380) | ung | 2625931..2626644 (+) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| U0544_RS13340 (U0544_13385) | hibch | 2626641..2627765 (+) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| U0544_RS13345 (U0544_13390) | tadA | 2627771..2628274 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=911936 U0544_RS13315 WP_002121425.1 2622898..2623278(+) (xcpV) [Acinetobacter pittii strain CARB128]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=911936 U0544_RS13315 WP_002121425.1 2622898..2623278(+) (xcpV) [Acinetobacter pittii strain CARB128]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |