Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | L6419_RS03295 | Genome accession | NZ_AP025332 |
| Coordinates | 646712..647761 (+) | Length | 349 a.a. |
| NCBI ID | WP_024533096.1 | Uniprot ID | - |
| Organism | Streptococcus ruminantium strain GUT-184 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 641712..652761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6419_RS03260 (GUT184_05940) | - | 641873..642937 (+) | 1065 | WP_155972356.1 | sensor histidine kinase | - |
| L6419_RS03265 (GUT184_05950) | - | 642934..643536 (+) | 603 | WP_120172024.1 | response regulator transcription factor | - |
| L6419_RS03270 (GUT184_05960) | - | 643848..644066 (+) | 219 | WP_024533101.1 | YqgQ family protein | - |
| L6419_RS03275 (GUT184_05970) | - | 644066..644452 (+) | 387 | WP_120172023.1 | rhodanese-like domain-containing protein | - |
| L6419_RS03280 (GUT184_05980) | - | 644510..645235 (+) | 726 | WP_024533099.1 | hypothetical protein | - |
| L6419_RS03285 (GUT184_05990) | rsmD | 645708..646247 (+) | 540 | WP_120172021.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| L6419_RS03290 (GUT184_06000) | coaD | 646237..646725 (+) | 489 | WP_024533097.1 | pantetheine-phosphate adenylyltransferase | - |
| L6419_RS03295 (GUT184_06010) | sepM | 646712..647761 (+) | 1050 | WP_024533096.1 | SepM family pheromone-processing serine protease | Regulator |
| L6419_RS03300 (GUT184_06020) | - | 647891..648547 (+) | 657 | WP_155964235.1 | YutD family protein | - |
| L6419_RS03305 (GUT184_06030) | rlmN | 648556..649668 (+) | 1113 | WP_237375648.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| L6419_RS03310 (GUT184_06040) | - | 649665..650183 (+) | 519 | WP_120172018.1 | VanZ family protein | - |
| L6419_RS03315 (GUT184_06050) | nadE | 650950..651774 (-) | 825 | WP_155962776.1 | ammonia-dependent NAD(+) synthetase | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 37571.79 Da Isoelectric Point: 4.7927
>NTDB_id=91181 L6419_RS03295 WP_024533096.1 646712..647761(+) (sepM) [Streptococcus ruminantium strain GUT-184]
MKKNRKLLLITSIVLGTLLIWFTVFVPLPYYLESPGGAADIRQVLTVNNQVDEKEGSYNFTYVSVQQATALQLLAAQFDP
HTSVRSAEEMAGGANSAEYFRIARFYMETSQNMAKYQGLTLAGKEANMKFFGVYVLNLAEDSTFKSILNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVIVGYISDGEEKSAKGKIIKLANGKNGIGIGLVDHTEVQSSVPIDFQTGNIGGPSAGLMF
TLAIYTQLADPDLRDGRMIAGTGTIEKDGKVGDIGGADKKVLSAAKAGASIFFVPNNPVDEAILKLNPNAKTNYEEAKES
AEKAAVDIEIVPVQTVQDAIDYLKKTKSE
MKKNRKLLLITSIVLGTLLIWFTVFVPLPYYLESPGGAADIRQVLTVNNQVDEKEGSYNFTYVSVQQATALQLLAAQFDP
HTSVRSAEEMAGGANSAEYFRIARFYMETSQNMAKYQGLTLAGKEANMKFFGVYVLNLAEDSTFKSILNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVIVGYISDGEEKSAKGKIIKLANGKNGIGIGLVDHTEVQSSVPIDFQTGNIGGPSAGLMF
TLAIYTQLADPDLRDGRMIAGTGTIEKDGKVGDIGGADKKVLSAAKAGASIFFVPNNPVDEAILKLNPNAKTNYEEAKES
AEKAAVDIEIVPVQTVQDAIDYLKKTKSE
Nucleotide
Download Length: 1050 bp
>NTDB_id=91181 L6419_RS03295 WP_024533096.1 646712..647761(+) (sepM) [Streptococcus ruminantium strain GUT-184]
ATGAAAAAAAATAGAAAACTACTCTTAATCACATCCATTGTTTTAGGAACTCTTTTGATTTGGTTTACTGTCTTTGTTCC
CCTACCTTATTATCTAGAAAGTCCTGGAGGAGCTGCTGATATTCGTCAAGTATTAACAGTAAATAATCAAGTCGACGAGA
AAGAGGGATCTTACAATTTTACTTATGTGTCTGTTCAGCAAGCTACAGCTTTGCAACTGTTAGCAGCCCAGTTTGACCCG
CATACAAGTGTGCGATCAGCCGAAGAGATGGCAGGTGGTGCCAATAGTGCAGAGTACTTCCGTATCGCTCGCTTCTACAT
GGAAACTTCACAGAATATGGCCAAATACCAAGGGTTAACCTTGGCAGGAAAAGAAGCGAATATGAAGTTCTTTGGCGTAT
ATGTTCTCAACTTGGCAGAAGATTCTACTTTTAAAAGTATTCTTAATATTGCTGATACAGTTGTTAGTATCAACGGAAAA
ACCTTTGAATCATCACCAGATTTAATCAAGTATGTTAGTGGTTTAGAATTGGGCAGTGATGTTATAGTTGGCTATATCAG
CGATGGGGAAGAAAAATCGGCCAAGGGTAAGATTATTAAATTAGCTAATGGTAAGAATGGTATTGGAATTGGTCTTGTTG
ACCATACGGAGGTTCAAAGCTCAGTTCCAATTGATTTCCAAACAGGTAATATAGGTGGACCAAGTGCAGGACTGATGTTC
ACTTTAGCTATCTATACTCAATTGGCAGATCCTGATTTGCGCGATGGACGGATGATTGCAGGAACGGGTACCATAGAAAA
AGATGGTAAGGTTGGAGATATTGGTGGAGCAGATAAAAAGGTTTTATCAGCGGCTAAAGCGGGAGCAAGTATCTTCTTTG
TCCCAAATAATCCAGTTGATGAAGCCATTTTGAAGCTGAATCCAAATGCCAAAACTAATTATGAAGAAGCGAAAGAATCG
GCTGAGAAGGCGGCTGTGGATATTGAGATTGTCCCTGTCCAGACTGTTCAAGACGCTATTGATTATCTTAAGAAGACAAA
GAGCGAGTAA
ATGAAAAAAAATAGAAAACTACTCTTAATCACATCCATTGTTTTAGGAACTCTTTTGATTTGGTTTACTGTCTTTGTTCC
CCTACCTTATTATCTAGAAAGTCCTGGAGGAGCTGCTGATATTCGTCAAGTATTAACAGTAAATAATCAAGTCGACGAGA
AAGAGGGATCTTACAATTTTACTTATGTGTCTGTTCAGCAAGCTACAGCTTTGCAACTGTTAGCAGCCCAGTTTGACCCG
CATACAAGTGTGCGATCAGCCGAAGAGATGGCAGGTGGTGCCAATAGTGCAGAGTACTTCCGTATCGCTCGCTTCTACAT
GGAAACTTCACAGAATATGGCCAAATACCAAGGGTTAACCTTGGCAGGAAAAGAAGCGAATATGAAGTTCTTTGGCGTAT
ATGTTCTCAACTTGGCAGAAGATTCTACTTTTAAAAGTATTCTTAATATTGCTGATACAGTTGTTAGTATCAACGGAAAA
ACCTTTGAATCATCACCAGATTTAATCAAGTATGTTAGTGGTTTAGAATTGGGCAGTGATGTTATAGTTGGCTATATCAG
CGATGGGGAAGAAAAATCGGCCAAGGGTAAGATTATTAAATTAGCTAATGGTAAGAATGGTATTGGAATTGGTCTTGTTG
ACCATACGGAGGTTCAAAGCTCAGTTCCAATTGATTTCCAAACAGGTAATATAGGTGGACCAAGTGCAGGACTGATGTTC
ACTTTAGCTATCTATACTCAATTGGCAGATCCTGATTTGCGCGATGGACGGATGATTGCAGGAACGGGTACCATAGAAAA
AGATGGTAAGGTTGGAGATATTGGTGGAGCAGATAAAAAGGTTTTATCAGCGGCTAAAGCGGGAGCAAGTATCTTCTTTG
TCCCAAATAATCCAGTTGATGAAGCCATTTTGAAGCTGAATCCAAATGCCAAAACTAATTATGAAGAAGCGAAAGAATCG
GCTGAGAAGGCGGCTGTGGATATTGAGATTGTCCCTGTCCAGACTGTTCAAGACGCTATTGATTATCTTAAGAAGACAAA
GAGCGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
60.519 |
99.427 |
0.602 |