Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SUT_RS10205 Genome accession   NZ_AP025331
Coordinates   2174468..2175226 (+) Length   252 a.a.
NCBI ID   WP_155963393.1    Uniprot ID   -
Organism   Streptococcus ruminantium strain GUT-183     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2169468..2180226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SUT_RS10165 (GUT183_19690) - 2169819..2170157 (+) 339 WP_029186211.1 DUF771 domain-containing protein -
  SUT_RS10170 (GUT183_19700) - 2170220..2171341 (+) 1122 WP_014638877.1 site-specific integrase -
  SUT_RS10190 (GUT183_19710) - 2171852..2172536 (-) 685 Protein_1978 YoaK family protein -
  SUT_RS10195 (GUT183_19720) rlmH 2172561..2173040 (-) 480 WP_024531474.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SUT_RS10200 (GUT183_19730) htrA 2173232..2174407 (+) 1176 WP_155963394.1 S1C family serine protease Regulator
  SUT_RS10205 (GUT183_19740) spo0J 2174468..2175226 (+) 759 WP_155963393.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28827.15 Da        Isoelectric Point: 9.5374

>NTDB_id=91156 SUT_RS10205 WP_155963393.1 2174468..2175226(+) (spo0J) [Streptococcus ruminantium strain GUT-183]
MEELRTLNISEIHPNPYQPRVHFDETKLAELAQSIRENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTEIPAVVKD
LTDDDLLRQAIIENLQRSDLNPIEEAQSYNNLINKGLTHDKIAQIMGKSRPYISNILRLLNLSTQTKKAVEEGKISQGHA
RQLLSLSEEKQAEWIQIILEKDLSVHALEKVLSNKKKKQVRQNNPFLKEQEVIISQHLGTTTKILQKKNGKGEIRIHFDN
LDEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=91156 SUT_RS10205 WP_155963393.1 2174468..2175226(+) (spo0J) [Streptococcus ruminantium strain GUT-183]
ATGGAAGAATTACGTACCCTAAATATTTCAGAGATACATCCAAATCCCTATCAACCAAGAGTTCATTTTGATGAAACCAA
ACTGGCTGAATTAGCGCAATCTATCAGAGAAAATGGATTGATTCAACCGATTATTGTAAGAAAATCGTCCATTATTGGAT
ACGAATTATTGGCTGGAGAAAGAAGATTACGCGCCAGTCAATTAGCTGGTCTAACTGAAATACCGGCCGTTGTAAAAGAT
TTAACTGATGATGATTTACTCCGTCAGGCAATTATAGAAAACCTACAACGCTCAGATTTAAATCCTATTGAAGAGGCGCA
ATCTTATAATAATTTGATAAATAAAGGATTGACACATGATAAAATTGCCCAAATTATGGGAAAATCAAGACCTTATATCA
GTAATATATTGCGACTCTTAAACTTATCCACTCAAACAAAAAAAGCTGTAGAAGAAGGAAAAATTTCACAGGGGCACGCG
CGACAATTGCTCTCACTTTCCGAGGAAAAACAAGCTGAATGGATTCAAATCATTTTAGAAAAAGATTTAAGTGTGCACGC
GCTTGAAAAAGTATTGTCCAATAAAAAGAAGAAACAAGTTAGACAGAACAATCCATTTTTAAAAGAACAAGAGGTCATTA
TTAGCCAGCATCTTGGAACAACTACAAAAATTCTCCAGAAAAAAAATGGGAAAGGGGAGATTCGGATTCATTTTGATAAT
CTAGATGAATTTGAAAGAATTATCAACAGCTTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-192)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.545

100

0.548

Multiple sequence alignment