Detailed information NTG0091152

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ64_RS21915
• Genome accession: NZ_AP027865
• Coordinates: 4489564..4490589 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017.20.01CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4484564..4495589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ64_RS21895 (VEE65_42150)	metJ	4485625..4485942 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ64_RS21900 (VEE65_42160)	yiiX	4486126..4486734 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ64_RS21905 (VEE65_42170)	rpmE	4486795..4487007 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ64_RS21910 (VEE65_42180)	priA	4487210..4489408 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABJ64_RS21915 (VEE65_42190)	cytR	4489564..4490589 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ64_RS21920 (VEE65_42200)	ftsN	4490681..4491640 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ64_RS21925 (VEE65_42210)	hslV	4491733..4492263 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ64_RS21930 (VEE65_42220)	hslU	4492273..4493604 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ64_RS21935 (VEE65_42230)	menA	4493671..4494597 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ64_RS21940 (VEE65_42240)	rraA	4494690..4495175 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ64_RS21945 (VEE65_42250)	zapB	4495260..4495505 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91152 AABJ64_RS21915 WP_000644904.1 4489564..4490589(+) (cytR) [Escherichia coli strain 2017.20.01CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91152 AABJ64_RS21915 WP_000644904.1 4489564..4490589(+) (cytR) [Escherichia coli strain 2017.20.01CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628