Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SUT_RS07715 Genome accession   NZ_AP025331
Coordinates   1636109..1637158 (-) Length   349 a.a.
NCBI ID   WP_024533096.1    Uniprot ID   -
Organism   Streptococcus ruminantium strain GUT-183     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1631109..1642158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SUT_RS07695 (GUT183_14850) nadE 1632092..1632916 (+) 825 WP_155971007.1 ammonia-dependent NAD(+) synthetase -
  SUT_RS07700 (GUT183_14860) - 1633687..1634205 (-) 519 WP_120172018.1 VanZ family protein -
  SUT_RS07705 (GUT183_14870) rlmN 1634202..1635314 (-) 1113 WP_237373127.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SUT_RS07710 (GUT183_14880) - 1635323..1635979 (-) 657 WP_155964235.1 YutD family protein -
  SUT_RS07715 (GUT183_14890) sepM 1636109..1637158 (-) 1050 WP_024533096.1 SepM family pheromone-processing serine protease Regulator
  SUT_RS07720 (GUT183_14900) coaD 1637145..1637633 (-) 489 WP_024533097.1 pantetheine-phosphate adenylyltransferase -
  SUT_RS07725 (GUT183_14910) rsmD 1637623..1638162 (-) 540 WP_120172021.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SUT_RS07730 (GUT183_14920) - 1638635..1639360 (-) 726 WP_237373128.1 serine protease -
  SUT_RS07735 (GUT183_14930) - 1639418..1639804 (-) 387 WP_120172023.1 rhodanese-like domain-containing protein -
  SUT_RS07740 (GUT183_14940) - 1639804..1640022 (-) 219 WP_024533101.1 YqgQ family protein -
  SUT_RS07745 (GUT183_14950) - 1640334..1640936 (-) 603 WP_237373130.1 response regulator transcription factor -
  SUT_RS07750 (GUT183_14960) - 1640933..1641853 (-) 921 WP_237373131.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37571.79 Da        Isoelectric Point: 4.7927

>NTDB_id=91145 SUT_RS07715 WP_024533096.1 1636109..1637158(-) (sepM) [Streptococcus ruminantium strain GUT-183]
MKKNRKLLLITSIVLGTLLIWFTVFVPLPYYLESPGGAADIRQVLTVNNQVDEKEGSYNFTYVSVQQATALQLLAAQFDP
HTSVRSAEEMAGGANSAEYFRIARFYMETSQNMAKYQGLTLAGKEANMKFFGVYVLNLAEDSTFKSILNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVIVGYISDGEEKSAKGKIIKLANGKNGIGIGLVDHTEVQSSVPIDFQTGNIGGPSAGLMF
TLAIYTQLADPDLRDGRMIAGTGTIEKDGKVGDIGGADKKVLSAAKAGASIFFVPNNPVDEAILKLNPNAKTNYEEAKES
AEKAAVDIEIVPVQTVQDAIDYLKKTKSE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=91145 SUT_RS07715 WP_024533096.1 1636109..1637158(-) (sepM) [Streptococcus ruminantium strain GUT-183]
ATGAAAAAAAATAGAAAACTACTCTTAATCACATCCATTGTTTTAGGAACTCTTTTGATTTGGTTTACTGTCTTTGTTCC
CCTACCTTATTATCTAGAAAGTCCTGGAGGAGCTGCTGATATTCGTCAAGTATTAACAGTAAATAATCAAGTCGACGAGA
AAGAGGGATCTTACAATTTTACTTATGTGTCTGTTCAGCAAGCTACAGCTTTGCAACTGTTAGCAGCCCAGTTTGACCCG
CATACAAGTGTGCGATCAGCCGAAGAGATGGCAGGTGGTGCCAATAGTGCAGAGTACTTCCGTATCGCTCGCTTCTACAT
GGAAACTTCACAGAATATGGCCAAATACCAAGGGTTAACCTTGGCAGGAAAAGAAGCGAATATGAAGTTCTTTGGCGTAT
ATGTTCTCAACTTGGCAGAAGATTCTACTTTTAAAAGTATTCTTAATATTGCTGATACAGTTGTTAGTATCAACGGAAAA
ACCTTTGAATCATCACCAGATTTAATCAAGTATGTTAGTGGTTTAGAATTGGGCAGTGATGTTATAGTTGGCTATATCAG
CGATGGGGAAGAAAAATCGGCCAAGGGTAAGATTATTAAATTAGCTAATGGTAAGAATGGTATTGGAATTGGTCTTGTTG
ACCATACGGAGGTTCAAAGCTCAGTTCCAATTGATTTCCAAACAGGTAATATAGGTGGACCAAGTGCAGGACTGATGTTC
ACTTTAGCTATCTATACTCAATTGGCAGATCCTGATTTGCGCGATGGACGGATGATTGCAGGAACGGGTACCATAGAAAA
AGATGGTAAGGTTGGAGATATTGGTGGAGCTGATAAAAAGGTTTTATCAGCGGCTAAAGCGGGAGCAAGTATCTTCTTTG
TCCCAAATAATCCAGTTGATGAAGCCATTTTGAAGCTGAATCCAAATGCCAAAACTAATTATGAAGAAGCGAAAGAATCG
GCTGAGAAGGCGGCTGTGGATATTGAGATTGTCCCTGTCCAGACTGTTCAAGACGCTATTGATTATCTTAAGAAGACAAA
GAGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.519

99.427

0.602


Multiple sequence alignment