Detailed information NTG0911099

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABU973_RS14530
• Genome accession: NZ_CP159170
• Coordinates: 2760979..2762004 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 10035776-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2755979..2767004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU973_RS14505 (ABU973_14505)	rraA	2756393..2756878 (-)	486	WP_001545067.1	ribonuclease E activity regulator RraA	-
ABU973_RS14510 (ABU973_14510)	menA	2756971..2757897 (-)	927	WP_001545069.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABU973_RS14515 (ABU973_14515)	hslU	2757964..2759295 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABU973_RS14520 (ABU973_14520)	hslV	2759305..2759835 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABU973_RS14525 (ABU973_14525)	ftsN	2759928..2760887 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABU973_RS14530 (ABU973_14530)	cytR	2760979..2762004 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABU973_RS14535 (ABU973_14535)	priA	2762160..2764358 (-)	2199	WP_001545073.1	primosomal protein N'	Machinery gene
ABU973_RS14540 (ABU973_14540)	rpmE	2764561..2764773 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABU973_RS14545 (ABU973_14545)	yiiX	2764834..2765442 (-)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
ABU973_RS14550 (ABU973_14550)	metJ	2765502..2765819 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=911099 ABU973_RS14530 WP_000644904.1 2760979..2762004(-) (cytR) [Escherichia coli strain 10035776-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=911099 ABU973_RS14530 WP_000644904.1 2760979..2762004(-) (cytR) [Escherichia coli strain 10035776-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628