Detailed information NTG0910800

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABU979_RS00640
• Genome accession: NZ_CP159141
• Coordinates: 88381..89406 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 10034940-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 83381..94406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU979_RS00620 (ABU979_00620)	metJ	84442..84759 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABU979_RS00625 (ABU979_00625)	yiiX	84943..85551 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABU979_RS00630 (ABU979_00630)	rpmE	85612..85824 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABU979_RS00635 (ABU979_00635)	priA	86027..88225 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABU979_RS00640 (ABU979_00640)	cytR	88381..89406 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABU979_RS00645 (ABU979_00645)	ftsN	89498..90457 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABU979_RS00650 (ABU979_00650)	hslV	90550..91080 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABU979_RS00655 (ABU979_00655)	hslU	91090..92421 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABU979_RS00660 (ABU979_00660)	menA	92488..93414 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABU979_RS00665 (ABU979_00665)	rraA	93507..93992 (+)	486	WP_353633133.1	ribonuclease E activity regulator RraA	-
ABU979_RS00670 (ABU979_00670)	zapB	94077..94322 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=910800 ABU979_RS00640 WP_000644904.1 88381..89406(+) (cytR) [Escherichia coli strain 10034940-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=910800 ABU979_RS00640 WP_000644904.1 88381..89406(+) (cytR) [Escherichia coli strain 10034940-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
AGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCAATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628