Detailed information NTG0910777

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABU963_RS18850
• Genome accession: NZ_CP159137
• Coordinates: 3537529..3538554 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 158274-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3532529..3543554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU963_RS18820 (ABU963_18815)	zapB	3532613..3532858 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABU963_RS18825 (ABU963_18820)	rraA	3532943..3533428 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABU963_RS18830 (ABU963_18825)	menA	3533521..3534447 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABU963_RS18835 (ABU963_18830)	hslU	3534514..3535845 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABU963_RS18840 (ABU963_18835)	hslV	3535855..3536385 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABU963_RS18845 (ABU963_18840)	ftsN	3536478..3537437 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABU963_RS18850 (ABU963_18845)	cytR	3537529..3538554 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABU963_RS18855 (ABU963_18850)	priA	3538710..3540908 (-)	2199	WP_001348093.1	primosomal protein N'	Machinery gene
ABU963_RS18860 (ABU963_18855)	rpmE	3541111..3541323 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=910777 ABU963_RS18850 WP_000644904.1 3537529..3538554(-) (cytR) [Escherichia coli strain 158274-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=910777 ABU963_RS18850 WP_000644904.1 3537529..3538554(-) (cytR) [Escherichia coli strain 158274-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628