Detailed information NTG0091072

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ85_RS21890
• Genome accession: NZ_AP027854
• Coordinates: 4443473..4444498 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017-19-1CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4438473..4449498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ85_RS21880 (VEE77_42340)	rpmE	4440704..4440916 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ85_RS21885 (VEE77_42350)	priA	4441119..4443317 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABJ85_RS21890 (VEE77_42360)	cytR	4443473..4444498 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ85_RS21895 (VEE77_42370)	ftsN	4444590..4445549 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ85_RS21900 (VEE77_42380)	hslV	4445642..4446172 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ85_RS21905 (VEE77_42390)	hslU	4446182..4447513 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ85_RS21910 (VEE77_42400)	menA	4447580..4448506 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ85_RS21915 (VEE77_42410)	rraA	4448599..4449084 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ85_RS21920 (VEE77_42420)	zapB	4449169..4449414 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91072 AABJ85_RS21890 WP_000644904.1 4443473..4444498(+) (cytR) [Escherichia coli strain 2017-19-1CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91072 AABJ85_RS21890 WP_000644904.1 4443473..4444498(+) (cytR) [Escherichia coli strain 2017-19-1CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628