Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABNQ24_RS15050 Genome accession   NZ_CP158968
Coordinates   3138719..3139186 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain EN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3133719..3144186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNQ24_RS15035 (ABNQ24_15005) - 3135238..3137469 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  ABNQ24_RS15040 (ABNQ24_15010) - 3137715..3138260 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  ABNQ24_RS15045 (ABNQ24_15015) pilH 3138319..3138687 (-) 369 WP_003269243.1 response regulator Machinery gene
  ABNQ24_RS15050 (ABNQ24_15020) pilG 3138719..3139186 (-) 468 WP_016723446.1 response regulator Regulator
  ABNQ24_RS15055 (ABNQ24_15025) - 3139477..3139659 (-) 183 WP_003261842.1 rubredoxin -
  ABNQ24_RS15060 (ABNQ24_15030) hemL 3139871..3141172 (+) 1302 WP_353627629.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ABNQ24_RS15065 (ABNQ24_15035) dapA 3141275..3142189 (-) 915 WP_028852677.1 4-hydroxy-tetrahydrodipicolinate synthase -
  ABNQ24_RS15070 (ABNQ24_15040) - 3142570..3143196 (+) 627 WP_058908262.1 LemA family protein -
  ABNQ24_RS15075 (ABNQ24_15045) - 3143209..3144057 (+) 849 WP_058908261.1 YgcG family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=910526 ABNQ24_RS15050 WP_016723446.1 3138719..3139186(-) (pilG) [Ralstonia pseudosolanacearum strain EN1]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=910526 ABNQ24_RS15050 WP_016723446.1 3138719..3139186(-) (pilG) [Ralstonia pseudosolanacearum strain EN1]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419