Detailed information NTG0910471

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABT396_RS21760
• Genome accession: NZ_CP158674
• Coordinates: 4440898..4441923 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain J53-KPC_Vir-P15
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4435898..4446923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABT396_RS21740 (ABT396_21745)	metJ	4436959..4437276 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABT396_RS21745 (ABT396_21750)	yiiX	4437460..4438068 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABT396_RS21750 (ABT396_21755)	rpmE	4438129..4438341 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABT396_RS21755 (ABT396_21760)	priA	4438544..4440742 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABT396_RS21760 (ABT396_21765)	cytR	4440898..4441923 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABT396_RS21765 (ABT396_21770)	ftsN	4442015..4442974 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABT396_RS21770 (ABT396_21775)	hslV	4443067..4443597 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABT396_RS21775 (ABT396_21780)	hslU	4443607..4444938 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABT396_RS21780 (ABT396_21785)	menA	4445005..4445931 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABT396_RS21785 (ABT396_21790)	rraA	4446024..4446509 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABT396_RS21790 (ABT396_21795)	zapB	4446594..4446839 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=910471 ABT396_RS21760 WP_000644904.1 4440898..4441923(+) (cytR) [Escherichia coli strain J53-KPC_Vir-P15]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=910471 ABT396_RS21760 WP_000644904.1 4440898..4441923(+) (cytR) [Escherichia coli strain J53-KPC_Vir-P15]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628